Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009825.1 Length=9355 Score E Sequences producing significant alignments: (Bits) Value seq731 223 2e-54 seq2038 208 5e-50 >seq731 Length=514 Score = 223 bits (246), Expect = 2e-54 Identities = 351/492 (71%), Gaps = 12/492 (2%) Strand=Plus/Minus Query 772 GCAACAGGGAATCTCCCCGGTTGCTCCTTTTCTATCTTCCTCTTGGCACTTCTTTCGTGC 831 ||||||||||| || || |||||||| || |||||||| || |||| || || || ||| Sbjct 514 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 455 Query 832 CTGACTGTCCCCGCTTCGGCCGTTAACTATCGCAATGTCTCAGGCATCTACCATGTCACC 891 |||||||| |||||||| ||| | | ||| ||| || | || ||||||||| Sbjct 454 CTGACTGTGCCCGCTTCAGCCTACCAGGTGCACAACTCCTCGGGGCTTTATCATGTCACC 395 Query 892 AATGACTGCCCGAATTCAAGCATAGTGTATGAGGCCGACCATCACATCATGCACCTTCCA 951 ||||| ||||| || || || || ||||| ||| | | | |||| |||| ||| Sbjct 394 AATGATTGCCCTAACTCGAGTATTGTGTACGAGACGGCTGACGCCATCCTGCATACTCCG 335 Query 952 GGTTGCGTGCCCTGCGTGAGAGAGGGGAATCAG-TCACGCTGCTGGGTGGCCCTTACTCC 1010 || || || || ||||| | ||||| || ||| || | || |||||||| | || || Sbjct 334 GGGTGTGTCCCTTGCGTTCGTGAGGGCAA-CAGCTCGAGGTGTTGGGTGGCGTTGACCCC 276 Query 1011 TACCGTCGCAGCGCCATACATCGGC--GCACCGCTTGAGTC--CTTACGGAGTCATGTGG 1066 || || || | ||| | |||| || || | || | ||| || |||| | | Sbjct 275 CACGGTGGC--CACCAAGGA-CGGCAAGCTCCCCACGACGCAGCTT-CGACGTCACATCG 220 Query 1067 ATTTGATGGTGGGGGCCGCCACTGTCTGCTCGGGTCTTTACATCGGGGACCTGTGTGGCG 1126 || || | || ||| |||||| ||||||||| ||||||| | ||||| ||||| || | Sbjct 219 ATCTGCTTGTCGGGAGCGCCACCCTCTGCTCGGCTCTTTACGTGGGGGATCTGTGCGG-G 161 Query 1127 GCT-TGTTCCTAGTTGGCCAGATGTTTTCATTCCGACCACGGCGCCACTGGACCACCCAG 1185 ||| | || || || || ||| ||||| | || || ||| ||||||||| || || Sbjct 160 GCTGTCTTTCTTGTCGGTCAGCTGTTTACCTTTTCTCCCAGGCACCACTGGACGACGCAA 101 Query 1186 GATTGCAATTGTTCCATCTACACAGGGCACATTACAGGCCACAGAATGGCCTGGGACATG 1245 || ||||||||||| ||||| | || ||||| || || ||| | ||||| ||||| ||| Sbjct 100 GAATGCAATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCATGGCATGGGATATG 41 Query 1246 ATGATGAACTGG 1257 |||||||||||| Sbjct 40 ATGATGAACTGG 29 >seq2038 Length=495 Score = 208 bits (230), Expect = 5e-50 Identities = 348/492 (71%), Gaps = 12/492 (2%) Strand=Plus/Minus Query 772 GCAACAGGGAATCTCCCCGGTTGCTCCTTTTCTATCTTCCTCTTGGCACTTCTTTCGTGC 831 ||||||||||| || || |||||||| || |||||||| || |||| || || || ||| Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436 Query 832 CTGACTGTCCCCGCTTCGGCC-GTTAACTATCGCAATGTCTCAGGCATCTACCATGTCAC 890 ||||||| ||||| || ||| || || ||||| | | ||| | ||||||||||| Sbjct 435 TTGACTGTACCCGCGTCAGCCTACCAAGTA-CGCAACTCCACGGGCCTTTACCATGTCAC 377 Query 891 CAATGACTGCCCGAATTCAAGCATAGTGTATGAGGCCGACCATCACATCATGCACCTTCC 950 |||||| ||||| || || ||||| ||||| ||| | | | || |||| | ||| ||| Sbjct 376 CAATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGCATCCTACACTCTCC 317 Query 951 AGGTTGCGTGCCCTGCGTGAGAGAGGGGAATCAGTCACGCTGCTGGGTGGCCCTTACTCC 1010 || || || || ||||| | ||||| || || | || |||||| | | | || Sbjct 316 GGGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCGCCCC 257 Query 1011 TACCGTCGCAGCGCCATACATCGG--CGCACCGCTTGAGTC--CTTACGGAGTCATGTGG 1066 || ||||| | ||| | ||| || || | | | ||| || |||| | | Sbjct 256 CACAGTCGC--CACCAGGGA-CGGTAAGCTCCCCACAACGCAGCTT-CGACGTCACATCG 201 Query 1067 ATTTGATGGTGGGGGCCGCCACTGTCTGCTCGGGTCTTTACATCGGGGACCTGTGTGGCG 1126 || || | || ||| |||||| ||||||||| || || | ||||||||||| || | Sbjct 200 ATCTGCTTGTCGGGAGCGCCACCCTCTGCTCGGCCCTCTATGTGGGGGACCTGTGCGG-G 142 Query 1127 GCT-TGTTCCTAGTTGGCCAGATGTTTTCATTCCGACCACGGCGCCACTGGACCACCCAG 1185 || | || || || || || |||| | ||| || ||||||||||||| || || Sbjct 141 TCTGTCTTTCTTGTCGGTCAACTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACGCAA 82 Query 1186 GATTGCAATTGTTCCATCTACACAGGGCACATTACAGGCCACAGAATGGCCTGGGACATG 1245 || ||||| |||||||||||| | || || || || || ||| | ||||| ||||| ||| Sbjct 81 GACTGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGGGATATG 22 Query 1246 ATGATGAACTGG 1257 |||||||||||| Sbjct 21 ATGATGAACTGG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29817807818204