Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_009826.1
Length=9343
Score E
Sequences producing significant alignments: (Bits) Value
seq2038 156 3e-34
seq731 143 2e-30
>seq2038
Length=495
Score = 156 bits (172), Expect = 3e-34
Identities = 347/507 (68%), Gaps = 24/507 (5%)
Strand=Plus/Minus
Query 772 GCAACAGGGAATCTACCCGGTTGCCCTTTCTCTATCTTTGTCCTTGCACTTCTTTGGTGC 831
||||||||||| || || |||||| |||||||||||||| | || || || || | |||
Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436
Query 832 CTGACCGTCCCCGCTTCCGCAGTTCCT--TACCGTAATGCTTCTGGGGTTTATCATGTCA 889
|||| || ||||| || || | || ||| | || | | || |||| |||||||
Sbjct 435 TTGACTGTACCCGCGTCAGCC-TACCAAGTAC-GCAACTCCACGGGCCTTTACCATGTCA 378
Query 890 CTAATGATTGCCCCAACTCTTCCATAGTCTACGAG---GCCGACAACCTGATCTTACACG 946
| ||||||||||| ||||| ||| || |||||| ||||| | | ||| |||||
Sbjct 377 CCAATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGC---ATCCTACACT 321
Query 947 CACCTGGTTGTGTGCCCTGTGTCCTGGAAGATAATGTCAGTAGGTGCTGGGTCCAAATCA 1006
| || || ||||| || || || | || | || | | || || ||||| | ||
Sbjct 320 CTCCGGGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCG 261
Query 1007 CCCCCACGCTGTCAGCCCCGAGCTTCGG--AGCAGTC-ACGGCCCTTCTTCGGAGAGCCG 1063
||||||| ||| ||| | || ||| ||| | || | | ||||| | |
Sbjct 260 CCCCCACA--GTC-GCCACCAGGGACGGTAAGCTCCCCACAACGCAGCTTCGACGTCACA 204
Query 1064 TTGA-CTACTTAGCAGGAGGGGCTGCCTTCTGCTCCGCGTTATACGTCGGAGACGCGTGT 1122
| || || ||| | |||| | | ||| |||||| || | || || || ||| |||
Sbjct 203 TCGATCTGCTTGTCGGGAGCGCCACCCT-CTGCTCGGCCCTCTATGTGGGGGACCTGTGC 145
Query 1123 GGGGCATTATCCTTGGTAGGCCAAATGTTCACCTATAAGCCT---CGCCAGCATACTACG 1179
||| | | | | || || ||| ||||||||| || ||||| || |||
Sbjct 144 GGGTCTGTCTTTCTTGTCGGTCAACTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACG 85
Query 1180 GTGCAGGACTGCAACTGTTCCATTTACAGTGGCCATATTACCGGCCACCGGATGGCATGG 1239
|| ||||||||||||||||| ||| |||||||| || || ||||| |||||||||
Sbjct 84 ---CAAGACTGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGG 28
Query 1240 GACATGATGATGAAATGGTCCCCTACG 1266
|| ||||||||||| ||||||||||||
Sbjct 27 GATATGATGATGAACTGGTCCCCTACG 1
>seq731
Length=514
Score = 143 bits (158), Expect = 2e-30
Identities = 335/500 (67%), Gaps = 8/500 (2%)
Strand=Plus/Minus
Query 772 GCAACAGGGAATCTACCCGGTTGCCCTTTCTCTATCTTTGTCCTTGCACTTCTTTGGTGC 831
||||||||||| || || |||||| |||||||||||||| | || || || || | |||
Sbjct 514 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 455
Query 832 CTGACCGTCCCCGCTTCCGCAGTTCCTTACCGTAATGCTTCTGGGGTTTATCATGTCACT 891
||||| || |||||||| || | | || | || ||| |||||||||||||
Sbjct 454 CTGACTGTGCCCGCTTCAGCCTACCAGGTGCACAACTCCTCGGGGCTTTATCATGTCACC 395
Query 892 AATGATTGCCCCAACTCTTCCATAGTCTACGAGGCCGACAACCTGATCTTACACGCACCT 951
||||||||||| ||||| || || |||||| | | || ||| | || | ||
Sbjct 394 AATGATTGCCCTAACTCGAGTATTGTGTACGAGACGGCTGACGCCATCCTGCATACTCCG 335
Query 952 GGTTGTGTGCCCTGTGTCCTGGAAGATAATGTCAGTAGGTGCTGGGTCCAAATCACCCCC 1011
|| ||||| || || || | || | || | ||||| ||||| | ||||||
Sbjct 334 GGGTGTGTCCCTTGCGTTCGTGAGGGCAACAGCTCGAGGTGTTGGGTGGCGTTGACCCCC 275
Query 1012 ACGCTGTCAGCCCCGAGCTTCGG--AGC-AGTCACGGCCCTTCTTCGGAGAGCCGTTGA- 1067
||| || ||| | | ||| ||| |||| | | ||||| | | | ||
Sbjct 274 ACGGTG---GCCACCAAGGACGGCAAGCTCCCCACGACGCAGCTTCGACGTCACATCGAT 218
Query 1068 CTACTTAGCAGGAGGGGCTGCCTTCTGCTCCGCGTTATACGTCGGAGACGCGTGTGGGGC 1127
|| ||| | ||| | || || ||||||| || | ||||| || || ||| |||||
Sbjct 217 CTGCTTGTCGGGA-GCGCCACCCTCTGCTCGGCTCTTTACGTGGGGGATCTGTGCGGGGC 159
Query 1128 ATTATCCTTGGTAGGCCAAATGTTCACCTATAAGCCTCGCCAGCATACTACGGTGCAGGA 1187
| | | || || || |||| |||| | || | || || ||| ||| ||
Sbjct 158 TGTCTTTCTTGTCGGTCAGCTGTTTACCTTTTCTCCCAGGCACCACTGGACGACGCAAGA 99
Query 1188 CTGCAACTGTTCCATTTACAGTGGCCATATTACCGGCCACCGGATGGCATGGGACATGAT 1247
||||| ||||| || || ||||| || || || ||||| ||||||||||| |||||
Sbjct 98 ATGCAATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCATGGCATGGGATATGAT 39
Query 1248 GATGAAATGGTCCCCTACGA 1267
|||||| |||||||||||||
Sbjct 38 GATGAACTGGTCCCCTACGA 19
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 29779411671212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |