Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009826.1 Length=9343 Score E Sequences producing significant alignments: (Bits) Value seq2038 156 3e-34 seq731 143 2e-30 >seq2038 Length=495 Score = 156 bits (172), Expect = 3e-34 Identities = 347/507 (68%), Gaps = 24/507 (5%) Strand=Plus/Minus Query 772 GCAACAGGGAATCTACCCGGTTGCCCTTTCTCTATCTTTGTCCTTGCACTTCTTTGGTGC 831 ||||||||||| || || |||||| |||||||||||||| | || || || || | ||| Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436 Query 832 CTGACCGTCCCCGCTTCCGCAGTTCCT--TACCGTAATGCTTCTGGGGTTTATCATGTCA 889 |||| || ||||| || || | || ||| | || | | || |||| ||||||| Sbjct 435 TTGACTGTACCCGCGTCAGCC-TACCAAGTAC-GCAACTCCACGGGCCTTTACCATGTCA 378 Query 890 CTAATGATTGCCCCAACTCTTCCATAGTCTACGAG---GCCGACAACCTGATCTTACACG 946 | ||||||||||| ||||| ||| || |||||| ||||| | | ||| ||||| Sbjct 377 CCAATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGC---ATCCTACACT 321 Query 947 CACCTGGTTGTGTGCCCTGTGTCCTGGAAGATAATGTCAGTAGGTGCTGGGTCCAAATCA 1006 | || || ||||| || || || | || | || | | || || ||||| | || Sbjct 320 CTCCGGGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCG 261 Query 1007 CCCCCACGCTGTCAGCCCCGAGCTTCGG--AGCAGTC-ACGGCCCTTCTTCGGAGAGCCG 1063 ||||||| ||| ||| | || ||| ||| | || | | ||||| | | Sbjct 260 CCCCCACA--GTC-GCCACCAGGGACGGTAAGCTCCCCACAACGCAGCTTCGACGTCACA 204 Query 1064 TTGA-CTACTTAGCAGGAGGGGCTGCCTTCTGCTCCGCGTTATACGTCGGAGACGCGTGT 1122 | || || ||| | |||| | | ||| |||||| || | || || || ||| ||| Sbjct 203 TCGATCTGCTTGTCGGGAGCGCCACCCT-CTGCTCGGCCCTCTATGTGGGGGACCTGTGC 145 Query 1123 GGGGCATTATCCTTGGTAGGCCAAATGTTCACCTATAAGCCT---CGCCAGCATACTACG 1179 ||| | | | | || || ||| ||||||||| || ||||| || ||| Sbjct 144 GGGTCTGTCTTTCTTGTCGGTCAACTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACG 85 Query 1180 GTGCAGGACTGCAACTGTTCCATTTACAGTGGCCATATTACCGGCCACCGGATGGCATGG 1239 || ||||||||||||||||| ||| |||||||| || || ||||| ||||||||| Sbjct 84 ---CAAGACTGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGG 28 Query 1240 GACATGATGATGAAATGGTCCCCTACG 1266 || ||||||||||| |||||||||||| Sbjct 27 GATATGATGATGAACTGGTCCCCTACG 1 >seq731 Length=514 Score = 143 bits (158), Expect = 2e-30 Identities = 335/500 (67%), Gaps = 8/500 (2%) Strand=Plus/Minus Query 772 GCAACAGGGAATCTACCCGGTTGCCCTTTCTCTATCTTTGTCCTTGCACTTCTTTGGTGC 831 ||||||||||| || || |||||| |||||||||||||| | || || || || | ||| Sbjct 514 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 455 Query 832 CTGACCGTCCCCGCTTCCGCAGTTCCTTACCGTAATGCTTCTGGGGTTTATCATGTCACT 891 ||||| || |||||||| || | | || | || ||| ||||||||||||| Sbjct 454 CTGACTGTGCCCGCTTCAGCCTACCAGGTGCACAACTCCTCGGGGCTTTATCATGTCACC 395 Query 892 AATGATTGCCCCAACTCTTCCATAGTCTACGAGGCCGACAACCTGATCTTACACGCACCT 951 ||||||||||| ||||| || || |||||| | | || ||| | || | || Sbjct 394 AATGATTGCCCTAACTCGAGTATTGTGTACGAGACGGCTGACGCCATCCTGCATACTCCG 335 Query 952 GGTTGTGTGCCCTGTGTCCTGGAAGATAATGTCAGTAGGTGCTGGGTCCAAATCACCCCC 1011 || ||||| || || || | || | || | ||||| ||||| | |||||| Sbjct 334 GGGTGTGTCCCTTGCGTTCGTGAGGGCAACAGCTCGAGGTGTTGGGTGGCGTTGACCCCC 275 Query 1012 ACGCTGTCAGCCCCGAGCTTCGG--AGC-AGTCACGGCCCTTCTTCGGAGAGCCGTTGA- 1067 ||| || ||| | | ||| ||| |||| | | ||||| | | | || Sbjct 274 ACGGTG---GCCACCAAGGACGGCAAGCTCCCCACGACGCAGCTTCGACGTCACATCGAT 218 Query 1068 CTACTTAGCAGGAGGGGCTGCCTTCTGCTCCGCGTTATACGTCGGAGACGCGTGTGGGGC 1127 || ||| | ||| | || || ||||||| || | ||||| || || ||| ||||| Sbjct 217 CTGCTTGTCGGGA-GCGCCACCCTCTGCTCGGCTCTTTACGTGGGGGATCTGTGCGGGGC 159 Query 1128 ATTATCCTTGGTAGGCCAAATGTTCACCTATAAGCCTCGCCAGCATACTACGGTGCAGGA 1187 | | | || || || |||| |||| | || | || || ||| ||| || Sbjct 158 TGTCTTTCTTGTCGGTCAGCTGTTTACCTTTTCTCCCAGGCACCACTGGACGACGCAAGA 99 Query 1188 CTGCAACTGTTCCATTTACAGTGGCCATATTACCGGCCACCGGATGGCATGGGACATGAT 1247 ||||| ||||| || || ||||| || || || ||||| ||||||||||| ||||| Sbjct 98 ATGCAATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCATGGCATGGGATATGAT 39 Query 1248 GATGAAATGGTCCCCTACGA 1267 |||||| ||||||||||||| Sbjct 38 GATGAACTGGTCCCCTACGA 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29779411671212