Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009827.1 Length=9628 Score E Sequences producing significant alignments: (Bits) Value seq2038 129 4e-26 seq731 113 3e-21 >seq2038 Length=495 Score = 129 bits (142), Expect = 4e-26 Identities = 335/500 (67%), Gaps = 12/500 (2%) Strand=Plus/Minus Query 835 GCAACAGGGAATCTTCCTGGTTGCTCTTTTTCTATCTTCATCCTGGCACTGCTCTCGTGC 894 ||||||||||| ||||||||||||||||| |||||||| | ||||| |||||||| ||| Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436 Query 895 CTCACCACACCAGCCTCGGCGCT--CACATACGGCAACTCCAGCGGGTTGTACCATCTAA 952 | || ||| || || || || || ||| ||||||||| || | |||||| | | Sbjct 435 TTGACTGTACCCGCGTCAGC-CTACCAAGTAC-GCAACTCCACGGGCCTTTACCATGTCA 378 Query 953 CCAATGATTGTCCACGCTCCAGCATAGTGCTGGAAGCGGAGGCCATGATCCTACACCTAG 1012 |||||||||| || ||| ||||| ||| || ||| | | ||||||||| Sbjct 377 CCAATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGCATCCTACACTCTC 318 Query 1013 CTGGTTGTGTGCCTTGCGTGAGAGCCGGAAACATTTCACGCTGCTGGCATCCTGTTTCAC 1072 | || ||||| |||||||| | | || ||| || | || ||| || || | | Sbjct 317 CGGGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCGCCC 258 Query 1073 CCACCCTGGCTGTACC--GAATGCCTCGGTGCCTGCGA-GCGGGTTCCGCAAACATGTGG 1129 |||| | || ||| | | | | | || | | || | || || || | | Sbjct 257 CCACAGTCGC--CACCAGGGACGGTAAGCTCCCCACAACGCAGCTT-CGACGTCACATCG 201 Query 1130 ATCTCCTCG-CAGGCGCTGCAGTCGTTTGCTCTTCGATGTATATCGGAGACCTCTGCGGT 1188 |||| || | | || || || | | ||||| | | ||| | || ||||| ||||| Sbjct 200 ATCTGCTTGTCGGGAGC-GCCACCCTCTGCTCGGCCCTCTATGTGGGGGACCTGTGCGGG 142 Query 1189 GCCGTATTTTTGGCAGGACAGTTGGCTACCTTCAGTCCTCGCATCCACGACATAACGCAG 1248 | || ||| | | || || || |||||| || | |||| | |||||| Sbjct 141 TCTGTCTTTCTTGTCGGTCAACTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACGCAA 82 Query 1249 GACTGCAATTGTTCGGTTTATACAGGCCATGTTACCGGCCACAGAATGGCGTGGGACATG 1308 |||||||| ||||| | || | |||||| | || || ||| | ||||| ||||| ||| Sbjct 81 GACTGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGGGATATG 22 Query 1309 ATGATGAACTGGTCGCCTAC 1328 |||||||||||||| ||||| Sbjct 21 ATGATGAACTGGTCCCCTAC 2 >seq731 Length=514 Score = 113 bits (124), Expect = 3e-21 Identities = 333/502 (66%), Gaps = 16/502 (3%) Strand=Plus/Minus Query 835 GCAACAGGGAATCTTCCTGGTTGCTCTTTTTCTATCTTCATCCTGGCACTGCTCTCGTGC 894 ||||||||||| ||||||||||||||||| |||||||| | ||||| |||||||| ||| Sbjct 514 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 455 Query 895 CTCACCACACCAGCCTCGGCGCTCACATACG-GCAACTCCAGCGGGTTGTACCATCTAAC 953 || || || || || || || || | ||||||| ||| | || ||| | || Sbjct 454 CTGACTGTGCCCGCTTCAGC-CTACCAGGTGCACAACTCCTCGGGGCTTTATCATGTCAC 396 Query 954 CAATGATTGTCCACGCTCCAGCATAGTGCTGGAAGCGGAGGCCATGATCCTACACCTAGC 1013 ||||||||| || ||| || || ||| || ||| | | ||||| || | Sbjct 395 CAATGATTGCCCTAACTCGAGTATTGTGTACGAGACGGCTGACGCCATCCTGCATACTCC 336 Query 1014 TGGTTGTGTGCCTTGCGTGAGAGCCGGAAACATTTCACGCTGCTGGCATCCTGTTTCACC 1073 || ||||| |||||||| | | || |||| || | || ||| | | | || Sbjct 335 GGGGTGTGTCCCTTGCGTTCGTGAGGGCAACAGCTCGAGGTGTTGGGTGGCGTTGACCCC 276 Query 1074 CACCCTGGCTGTACC--GAATGCCTCGGTGCCTGCGA-GCGGGTTCCGCAAACATGTGGA 1130 ||| |||| ||| | | | | | | || ||| || | || || || | || Sbjct 275 CACGGTGGC--CACCAAGGACGGCAAGCTCCCCACGACGCAGCTT-CGACGTCACATCGA 219 Query 1131 TCTCCTCG-CAGGCGCTGCAGTCGTTTGCTCTTCGATGTATATCGGAGACCTCTGCGGTG 1189 ||| || | | || || || | | ||||| | | || | || || || ||||| | Sbjct 218 TCTGCTTGTCGGGAGC-GCCACCCTCTGCTCGGCTCTTTACGTGGGGGATCTGTGCGGGG 160 Query 1190 CCGTATTTTTGGCAGGACAGTTGGCTACCTTCAGTCCTCGCATCCACGAC---ATAACGC 1246 | || ||| | | || ||| || |||||| | ||| || ||| || | |||| Sbjct 159 CTGTCTTTCTTGTCGGTCAGCTGTTTACCTT---TTCTCCCAGGCACCACTGGACGACGC 103 Query 1247 AGGACTGCAATTGTTCGGTTTATACAGGCCATGTTACCGGCCACAGAATGGCGTGGGACA 1306 | || ||||||||||| | ||| | ||||| | || || ||| | ||||| ||||| | Sbjct 102 AAGAATGCAATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCATGGCATGGGATA 43 Query 1307 TGATGATGAACTGGTCGCCTAC 1328 |||||||||||||||| ||||| Sbjct 42 TGATGATGAACTGGTCCCCTAC 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30691320162272