Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_009827.1
Length=9628
Score E
Sequences producing significant alignments: (Bits) Value
seq2038 129 4e-26
seq731 113 3e-21
>seq2038
Length=495
Score = 129 bits (142), Expect = 4e-26
Identities = 335/500 (67%), Gaps = 12/500 (2%)
Strand=Plus/Minus
Query 835 GCAACAGGGAATCTTCCTGGTTGCTCTTTTTCTATCTTCATCCTGGCACTGCTCTCGTGC 894
||||||||||| ||||||||||||||||| |||||||| | ||||| |||||||| |||
Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436
Query 895 CTCACCACACCAGCCTCGGCGCT--CACATACGGCAACTCCAGCGGGTTGTACCATCTAA 952
| || ||| || || || || || ||| ||||||||| || | |||||| | |
Sbjct 435 TTGACTGTACCCGCGTCAGC-CTACCAAGTAC-GCAACTCCACGGGCCTTTACCATGTCA 378
Query 953 CCAATGATTGTCCACGCTCCAGCATAGTGCTGGAAGCGGAGGCCATGATCCTACACCTAG 1012
|||||||||| || ||| ||||| ||| || ||| | | |||||||||
Sbjct 377 CCAATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGCATCCTACACTCTC 318
Query 1013 CTGGTTGTGTGCCTTGCGTGAGAGCCGGAAACATTTCACGCTGCTGGCATCCTGTTTCAC 1072
| || ||||| |||||||| | | || ||| || | || ||| || || | |
Sbjct 317 CGGGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCGCCC 258
Query 1073 CCACCCTGGCTGTACC--GAATGCCTCGGTGCCTGCGA-GCGGGTTCCGCAAACATGTGG 1129
|||| | || ||| | | | | | || | | || | || || || | |
Sbjct 257 CCACAGTCGC--CACCAGGGACGGTAAGCTCCCCACAACGCAGCTT-CGACGTCACATCG 201
Query 1130 ATCTCCTCG-CAGGCGCTGCAGTCGTTTGCTCTTCGATGTATATCGGAGACCTCTGCGGT 1188
|||| || | | || || || | | ||||| | | ||| | || ||||| |||||
Sbjct 200 ATCTGCTTGTCGGGAGC-GCCACCCTCTGCTCGGCCCTCTATGTGGGGGACCTGTGCGGG 142
Query 1189 GCCGTATTTTTGGCAGGACAGTTGGCTACCTTCAGTCCTCGCATCCACGACATAACGCAG 1248
| || ||| | | || || || |||||| || | |||| | ||||||
Sbjct 141 TCTGTCTTTCTTGTCGGTCAACTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACGCAA 82
Query 1249 GACTGCAATTGTTCGGTTTATACAGGCCATGTTACCGGCCACAGAATGGCGTGGGACATG 1308
|||||||| ||||| | || | |||||| | || || ||| | ||||| ||||| |||
Sbjct 81 GACTGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGGGATATG 22
Query 1309 ATGATGAACTGGTCGCCTAC 1328
|||||||||||||| |||||
Sbjct 21 ATGATGAACTGGTCCCCTAC 2
>seq731
Length=514
Score = 113 bits (124), Expect = 3e-21
Identities = 333/502 (66%), Gaps = 16/502 (3%)
Strand=Plus/Minus
Query 835 GCAACAGGGAATCTTCCTGGTTGCTCTTTTTCTATCTTCATCCTGGCACTGCTCTCGTGC 894
||||||||||| ||||||||||||||||| |||||||| | ||||| |||||||| |||
Sbjct 514 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 455
Query 895 CTCACCACACCAGCCTCGGCGCTCACATACG-GCAACTCCAGCGGGTTGTACCATCTAAC 953
|| || || || || || || || | ||||||| ||| | || ||| | ||
Sbjct 454 CTGACTGTGCCCGCTTCAGC-CTACCAGGTGCACAACTCCTCGGGGCTTTATCATGTCAC 396
Query 954 CAATGATTGTCCACGCTCCAGCATAGTGCTGGAAGCGGAGGCCATGATCCTACACCTAGC 1013
||||||||| || ||| || || ||| || ||| | | ||||| || |
Sbjct 395 CAATGATTGCCCTAACTCGAGTATTGTGTACGAGACGGCTGACGCCATCCTGCATACTCC 336
Query 1014 TGGTTGTGTGCCTTGCGTGAGAGCCGGAAACATTTCACGCTGCTGGCATCCTGTTTCACC 1073
|| ||||| |||||||| | | || |||| || | || ||| | | | ||
Sbjct 335 GGGGTGTGTCCCTTGCGTTCGTGAGGGCAACAGCTCGAGGTGTTGGGTGGCGTTGACCCC 276
Query 1074 CACCCTGGCTGTACC--GAATGCCTCGGTGCCTGCGA-GCGGGTTCCGCAAACATGTGGA 1130
||| |||| ||| | | | | | | || ||| || | || || || | ||
Sbjct 275 CACGGTGGC--CACCAAGGACGGCAAGCTCCCCACGACGCAGCTT-CGACGTCACATCGA 219
Query 1131 TCTCCTCG-CAGGCGCTGCAGTCGTTTGCTCTTCGATGTATATCGGAGACCTCTGCGGTG 1189
||| || | | || || || | | ||||| | | || | || || || ||||| |
Sbjct 218 TCTGCTTGTCGGGAGC-GCCACCCTCTGCTCGGCTCTTTACGTGGGGGATCTGTGCGGGG 160
Query 1190 CCGTATTTTTGGCAGGACAGTTGGCTACCTTCAGTCCTCGCATCCACGAC---ATAACGC 1246
| || ||| | | || ||| || |||||| | ||| || ||| || | ||||
Sbjct 159 CTGTCTTTCTTGTCGGTCAGCTGTTTACCTT---TTCTCCCAGGCACCACTGGACGACGC 103
Query 1247 AGGACTGCAATTGTTCGGTTTATACAGGCCATGTTACCGGCCACAGAATGGCGTGGGACA 1306
| || ||||||||||| | ||| | ||||| | || || ||| | ||||| ||||| |
Sbjct 102 AAGAATGCAATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCATGGCATGGGATA 43
Query 1307 TGATGATGAACTGGTCGCCTAC 1328
|||||||||||||||| |||||
Sbjct 42 TGATGATGAACTGGTCCCCTAC 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 30691320162272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |