Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_030791.1
Length=9443
Score E
Sequences producing significant alignments: (Bits) Value
seq2038 181 6e-42
seq731 176 3e-40
>seq2038
Length=495
Score = 181 bits (200), Expect = 6e-42
Identities = 338/489 (69%), Gaps = 6/489 (1%)
Strand=Plus/Minus
Query 832 GCAACAGGGAACTTGCCTGGTTGCTCCTTTTCTATCTTCYTACTAGCCCTCCTGTCATGT 891
|||||||||||| | ||||||||||| || |||||||| | || ||||| || || ||
Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436
Query 892 CTAACAGTCCCGGCATCGGCTTATGAAGTCCGCAACTCCAGTGGRGTCTATCATCTCACC 951
| || || || || || || || |||| |||||||||| || | || ||| |||||
Sbjct 435 TTGACTGTACCCGCGTCAGCCTACCAAGTACGCAACTCCACGGGCCTTTACCATGTCACC 376
Query 952 AATGACTGCCCCAACGCTAGTATAGTCTATGAAACAGACAACGCCATCCTACACGAGCCT 1011
||||| ||||| ||| | || || || || || || | | | |||||||||| ||
Sbjct 375 AATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGCATCCTACACTCTCCG 316
Query 1012 GGGTGCGTGCCTTGCGTTCGCGAGGGTAATACTAGCAGGTGTTGGGAACCAGTGGCCCCC 1071
||||| || ||||||||||||||||| || | || ||||||| || || ||||||
Sbjct 315 GGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCGCCCCC 256
Query 1072 ACTTTGGCGGTCCGCTATCGCGGAGCGCTTACTGACG-ATTTGCGGACG-CATATTGACC 1129
|| | || | | | || ||| | ||| | | | |||| || || || |
Sbjct 255 ACAGTCGCCACCAGGGA-CGGTAAGCTCCCCACAACGCAGCTTC-GACGTCACATCGATC 198
Query 1130 TAGTGGTGGCGTCAGCTACCCTGTGCTCCGCCTTGTACGTGGGGGACATTTGTGGAGCCA 1189
| | || | | || ||||| ||||| ||| | || ||||||||| | || || |
Sbjct 197 TGCTTGTCGGGAGCGCCACCCTCTGCTCGGCCCTCTATGTGGGGGACCTGTGCGGGTCTG 138
Query 1190 TCTTCATTGCCAGCCAAGCTGTTC-TCTGGAAGCCCggggggggTCGGATAGTGCAAGAT 1248
|||| ||| | | ||| |||||| || ||| || | ||| | ||||||
Sbjct 137 TCTTTCTTGTCGGTCAA-CTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACGCAAGAC 79
Query 1249 TGCAATTGTTCGATCTACCCGGGCCACGTCACCGGCCACAGGATGGCGTGGGACATGATG 1308
||||| ||||| |||||||| ||||| | || || ||| | ||||| ||||| ||||||
Sbjct 78 TGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGGGATATGATG 19
Query 1309 CAGAACTGG 1317
|||||||
Sbjct 18 ATGAACTGG 10
>seq731
Length=514
Score = 176 bits (194), Expect = 3e-40
Identities = 340/492 (69%), Gaps = 12/492 (2%)
Strand=Plus/Minus
Query 832 GCAACAGGGAACTTGCCTGGTTGCTCCTTTTCTATCTTCYTACTAGCCCTCCTGTCATGT 891
|||||||||||| | ||||||||||| || |||||||| | || ||||| || || ||
Sbjct 514 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 455
Query 892 CTAACAGTCCCGGCATCGGCTTATGAAGTCCGCAACTCCAGTGGRGTCTATCATCTCACC 951
|| || || || || || || || | || | ||||||| || | |||||| |||||
Sbjct 454 CTGACTGTGCCCGCTTCAGCCTACCAGGTGCACAACTCCTCGGGGCTTTATCATGTCACC 395
Query 952 AATGACTGCCCCAACGCTAGTATAGTCTATGAAACAGACAACGCCATCCTACACGAGCCT 1011
||||| ||||| ||| | ||||| || || || || | |||||||||| || ||
Sbjct 394 AATGATTGCCCTAACTCGAGTATTGTGTACGAGACGGCTGACGCCATCCTGCATACTCCG 335
Query 1012 GGGTGCGTGCCTTGCGTTCGCGAGGGTAATA-CTAGCAGGTGTTGGGAACCAGTGGCCCC 1070
||||| || ||||||||||| ||||| || | || | |||||||||| | || ||||
Sbjct 334 GGGTGTGTCCCTTGCGTTCGTGAGGGCAACAGCTCG-AGGTGTTGGGTGGCGTTGACCCC 276
Query 1071 CACTTTGGCGGTCCGCTATCGCGG--AGCGCTTACTGACG-ATTTGCGGACG-CATATTG 1126
||| || || | | | ||| ||| | |||| | | | |||| || || |
Sbjct 275 CAC---GGTGGCCACCAAGGACGGCAAGCTCCCCACGACGCAGCTTC-GACGTCACATCG 220
Query 1127 ACCTAGTGGTGGCGTCAGCTACCCTGTGCTCCGCCTTGTACGTGGGGGACATTTGTGGAG 1186
| || | || | | || ||||| ||||| || | ||||||||||| | || || |
Sbjct 219 ATCTGCTTGTCGGGAGCGCCACCCTCTGCTCGGCTCTTTACGTGGGGGATCTGTGCGGGG 160
Query 1187 CCATCTTCATTGCCAGCCAAGCTG-TTCTCTGGAAGCCCggggggggTCGGATAGTGCAA 1245
| |||| ||| | | | ||||| || || ||| || ||| ||||
Sbjct 159 CTGTCTTTCTTGTCGGTC-AGCTGTTTACCTTTTCTCCCAGGCACCACTGGACGACGCAA 101
Query 1246 GATTGCAATTGTTCGATCTACCCGGGCCACGTCACCGGCCACAGGATGGCGTGGGACATG 1305
|| ||||||||||| ||||| || |||||| | || || ||| | ||||| ||||| |||
Sbjct 100 GAATGCAATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCATGGCATGGGATATG 41
Query 1306 ATGCAGAACTGG 1317
||| |||||||
Sbjct 40 ATGATGAACTGG 29
Lambda K H
0.636 0.409 0.916
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 30099379562812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |