Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_030791.1 Length=9443 Score E Sequences producing significant alignments: (Bits) Value seq2038 181 6e-42 seq731 176 3e-40 >seq2038 Length=495 Score = 181 bits (200), Expect = 6e-42 Identities = 338/489 (69%), Gaps = 6/489 (1%) Strand=Plus/Minus Query 832 GCAACAGGGAACTTGCCTGGTTGCTCCTTTTCTATCTTCYTACTAGCCCTCCTGTCATGT 891 |||||||||||| | ||||||||||| || |||||||| | || ||||| || || || Sbjct 495 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 436 Query 892 CTAACAGTCCCGGCATCGGCTTATGAAGTCCGCAACTCCAGTGGRGTCTATCATCTCACC 951 | || || || || || || || |||| |||||||||| || | || ||| ||||| Sbjct 435 TTGACTGTACCCGCGTCAGCCTACCAAGTACGCAACTCCACGGGCCTTTACCATGTCACC 376 Query 952 AATGACTGCCCCAACGCTAGTATAGTCTATGAAACAGACAACGCCATCCTACACGAGCCT 1011 ||||| ||||| ||| | || || || || || || | | | |||||||||| || Sbjct 375 AATGATTGCCCTAACTCGAGCATTGTGTACGAGACGGCCGATAGCATCCTACACTCTCCG 316 Query 1012 GGGTGCGTGCCTTGCGTTCGCGAGGGTAATACTAGCAGGTGTTGGGAACCAGTGGCCCCC 1071 ||||| || ||||||||||||||||| || | || ||||||| || || |||||| Sbjct 315 GGGTGTGTCCCTTGCGTTCGCGAGGGCAACGCCTCGAGATGTTGGGTGCCGGTCGCCCCC 256 Query 1072 ACTTTGGCGGTCCGCTATCGCGGAGCGCTTACTGACG-ATTTGCGGACG-CATATTGACC 1129 || | || | | | || ||| | ||| | | | |||| || || || | Sbjct 255 ACAGTCGCCACCAGGGA-CGGTAAGCTCCCCACAACGCAGCTTC-GACGTCACATCGATC 198 Query 1130 TAGTGGTGGCGTCAGCTACCCTGTGCTCCGCCTTGTACGTGGGGGACATTTGTGGAGCCA 1189 | | || | | || ||||| ||||| ||| | || ||||||||| | || || | Sbjct 197 TGCTTGTCGGGAGCGCCACCCTCTGCTCGGCCCTCTATGTGGGGGACCTGTGCGGGTCTG 138 Query 1190 TCTTCATTGCCAGCCAAGCTGTTC-TCTGGAAGCCCggggggggTCGGATAGTGCAAGAT 1248 |||| ||| | | ||| |||||| || ||| || | ||| | |||||| Sbjct 137 TCTTTCTTGTCGGTCAA-CTGTTCACCTTCTCCCCCAGGCGCCACTGGACAACGCAAGAC 79 Query 1249 TGCAATTGTTCGATCTACCCGGGCCACGTCACCGGCCACAGGATGGCGTGGGACATGATG 1308 ||||| ||||| |||||||| ||||| | || || ||| | ||||| ||||| |||||| Sbjct 78 TGCAACTGTTCCATCTACCCCGGCCATATAACGGGTCACCGCATGGCATGGGATATGATG 19 Query 1309 CAGAACTGG 1317 ||||||| Sbjct 18 ATGAACTGG 10 >seq731 Length=514 Score = 176 bits (194), Expect = 3e-40 Identities = 340/492 (69%), Gaps = 12/492 (2%) Strand=Plus/Minus Query 832 GCAACAGGGAACTTGCCTGGTTGCTCCTTTTCTATCTTCYTACTAGCCCTCCTGTCATGT 891 |||||||||||| | ||||||||||| || |||||||| | || ||||| || || || Sbjct 514 GCAACAGGGAACCTTCCTGGTTGCTCTTTCTCTATCTTTCTTCTGGCCCTGCTCTCTTGC 455 Query 892 CTAACAGTCCCGGCATCGGCTTATGAAGTCCGCAACTCCAGTGGRGTCTATCATCTCACC 951 || || || || || || || || | || | ||||||| || | |||||| ||||| Sbjct 454 CTGACTGTGCCCGCTTCAGCCTACCAGGTGCACAACTCCTCGGGGCTTTATCATGTCACC 395 Query 952 AATGACTGCCCCAACGCTAGTATAGTCTATGAAACAGACAACGCCATCCTACACGAGCCT 1011 ||||| ||||| ||| | ||||| || || || || | |||||||||| || || Sbjct 394 AATGATTGCCCTAACTCGAGTATTGTGTACGAGACGGCTGACGCCATCCTGCATACTCCG 335 Query 1012 GGGTGCGTGCCTTGCGTTCGCGAGGGTAATA-CTAGCAGGTGTTGGGAACCAGTGGCCCC 1070 ||||| || ||||||||||| ||||| || | || | |||||||||| | || |||| Sbjct 334 GGGTGTGTCCCTTGCGTTCGTGAGGGCAACAGCTCG-AGGTGTTGGGTGGCGTTGACCCC 276 Query 1071 CACTTTGGCGGTCCGCTATCGCGG--AGCGCTTACTGACG-ATTTGCGGACG-CATATTG 1126 ||| || || | | | ||| ||| | |||| | | | |||| || || | Sbjct 275 CAC---GGTGGCCACCAAGGACGGCAAGCTCCCCACGACGCAGCTTC-GACGTCACATCG 220 Query 1127 ACCTAGTGGTGGCGTCAGCTACCCTGTGCTCCGCCTTGTACGTGGGGGACATTTGTGGAG 1186 | || | || | | || ||||| ||||| || | ||||||||||| | || || | Sbjct 219 ATCTGCTTGTCGGGAGCGCCACCCTCTGCTCGGCTCTTTACGTGGGGGATCTGTGCGGGG 160 Query 1187 CCATCTTCATTGCCAGCCAAGCTG-TTCTCTGGAAGCCCggggggggTCGGATAGTGCAA 1245 | |||| ||| | | | ||||| || || ||| || ||| |||| Sbjct 159 CTGTCTTTCTTGTCGGTC-AGCTGTTTACCTTTTCTCCCAGGCACCACTGGACGACGCAA 101 Query 1246 GATTGCAATTGTTCGATCTACCCGGGCCACGTCACCGGCCACAGGATGGCGTGGGACATG 1305 || ||||||||||| ||||| || |||||| | || || ||| | ||||| ||||| ||| Sbjct 100 GAATGCAATTGTTCTATCTATCCCGGCCACATAACGGGTCACCGCATGGCATGGGATATG 41 Query 1306 ATGCAGAACTGG 1317 ||| ||||||| Sbjct 40 ATGATGAACTGG 29 Lambda K H 0.636 0.409 0.916 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 30099379562812