Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_030922.1 Length=6673 Score E Sequences producing significant alignments: (Bits) Value seq35492 320 7e-84 seq78515 260 6e-66 seq60362 196 2e-46 >seq35492 Length=584 Score = 320 bits (354), Expect = 7e-84 Identities = 367/491 (75%), Gaps = 2/491 (0%) Strand=Plus/Minus Query 4870 GAAACCTTCCGCTATTGGTGGTGATCAATTACTTCTACAAGGTGGACATCACCCTGACCT 4929 ||||| ||||| ||| || || |||||| | | || ||||| || || || || || || Sbjct 540 GAAACTTTCCGTTAT-GGCGGCGATCAACTGTTGCTGCAAGGCGGCCACCATCCAGATCT 482 Query 4930 TGGATTGAGTTTCTACACCAACCTTTTCAAACAACTAAAGGAACTTTACCCAACCCTTAG 4989 || ||| ||||| ||| | ||||| ||| |||| || ||||| |||||||| |||| Sbjct 481 GGGCCTGAAATTCTATACCGATCTTTTTAAAGAACTGAAAGAACTATACCCAACACTTAA 422 Query 4990 GCTTCTCTCCTTAGGGCCACCAGAAATTGCGCACGTAGCAAAACTGGAAGGCATGAGCCA 5049 || | ||| ||||| || || ||||||||||||||||| || ||||||||||||||||| Sbjct 421 ACTACACTCATTAGGCCCGCCCGAAATTGCGCACGTAGCTAAGCTGGAAGGCATGAGCCA 362 Query 5050 CCTTGAAGTCTGGACGGCCATTCAAGAAGCTGGATTGGATTCCCTGCCGGGGGCTGGTGC 5109 || || || ||||| || || |||| ||||||| || || || || ||||| Sbjct 361 TTACGATGTGCTGAAAGCCATGCAGGAGTCTGGCCTGGATTCACTCCCCGGTGCCGGTGC 302 Query 5110 AGAAATATTGAACGACCGTGTCCGTATATTGATCTCTATGGGTAAATGTGGTGGTCAAGA 5169 || |||||||| ||||| || || | || || | || ||||| || ||| |||| Sbjct 301 GGAGATATTGAATGACCGCGTACGCCGGCTAATATCAAAAGGCAAATGCGGCGGTAAAGA 242 Query 5170 ATGGTTGGATGTGATGCGTGCTGCCCACAAAATCAATCTTCCAACTTCGGCAACCATGAT 5229 |||| ||||||||||||| || || |||||| | || || ||| | |||||||| ||||| Sbjct 241 ATGGCTGGATGTGATGCGCGCGGCACACAAACTAAACCTGCCATCGTCGGCAACGATGAT 182 Query 5230 GTTTGGACATATGGGAAACAATCGAAGAACGTTTCGAGCACTTGGTATGGCTTCGCGAAG 5289 |||||| ||| | |||||| || ||||| || || ||||| |||| |||| | ||||| | Sbjct 181 GTTTGGCCATGT-GGAAACGATTGAAGAGCGCTTTGAGCATTTGGCATGGATCCGCGAGG 123 Query 5290 TACAAAGCGAAAAACCAGCCGATGCTTATGGATTCATCGCCTTTATCCCTTGGCCTTTCC 5349 |||| |||||| || | | | || || |||||||||||||| |||||||||| Sbjct 122 TACAGTCCGAAAAGCCCGAAGGCAACCACGGTTTTATCGCCTTTATCCCCTGGCCTTTCC 63 Query 5350 AAGAGGATGGT 5360 | || || ||| Sbjct 62 AGGATGACGGT 52 >seq78515 Length=859 Score = 260 bits (288), Expect = 6e-66 Identities = 354/491 (72%), Gaps = 2/491 (0%) Strand=Plus/Plus Query 4870 GAAACCTTCCGCTATTGGTGGTGATCAATTACTTCTACAAGGTGGACATCACCCTGACCT 4929 ||||| ||||||| |||| || ||||| | | | || || || || ||||| || || Sbjct 320 GAAACTTTCCGCT-TTGGCGGCGATCAGCTTTTATTGCAGGGCGGGCACCACCCCGATCT 378 Query 4930 TGGATTGAGTTTCTACACCAACCTTTTCAAACAACTAAAGGAACTTTACCCAACCCTTAG 4989 || || | ||||| ||| | ||||||| | | || ||||| || |||||||||| Sbjct 379 GGGCTTAAAGTTCTATACCGATCTTTTCAGGGAGTTGAAAGAACTGTATCCAACCCTTAA 438 Query 4990 GCTTCTCTCCTTAGGGCCACCAGAAATTGCGCACGTAGCAAAACTGGAAGGCATGAGCCA 5049 | | ||||||||| || || ||||| || |||||||| || | ||||| |||||||| Sbjct 439 ATTACACTCCTTAGGCCCGCCCGAAATAGCCCACGTAGCCAAGTTAGAAGGTATGAGCCA 498 Query 5050 CCTTGAAGTCTGGACGGCCATTCAAGAAGCTGGATTGGATTCCCTGCCGGGGGCTGGTGC 5109 || || | || || ||||| | ||||||||||| || || || || ||||| Sbjct 499 TTACGATGTGCTTAAAGCGATGAAAGAATCCGGATTGGATTCACTACCCGGCGCAGGTGC 558 Query 5110 AGAAATATTGAACGACCGTGTCCGTATATTGATCTCTATGGGTAAATGTGGTGGTCAAGA 5169 || || |||||||||| || || |||| |||| || ||||| || ||| |||| Sbjct 559 CGAGATCCTGAACGACCGGGTGCGCCGCCTGATATCTAAAGGAAAATGCGGCGGTAAAGA 618 Query 5170 ATGGTTGGATGTGATGCGTGCTGCCCACAAAATCAATCTTCCAACTTCGGCAACCATGAT 5229 |||| ||||||| ||||| || ||||| | | || || ||| | ||||| |||||||| Sbjct 619 ATGGCTGGATGTAATGCGCGCGGCCCATCAGCTTAACCTGCCATCATCGGCCACCATGAT 678 Query 5230 GTTTGGACATATGGGAAACAATCGAAGAACGTTTCGAGCACTTGGTATGGCTTCGCGAAG 5289 ||||||||| | || || || ||||| ||||| || ||| |||| ||| | || || | Sbjct 679 GTTTGGACACGT-AGAGACTATTGAAGAGCGTTTTGAACACCTGGTTTGGATCCGTGAGG 737 Query 5290 TACAAAGCGAAAAACCAGCCGATGCTTATGGATTCATCGCCTTTATCCCTTGGCCTTTCC 5349 ||||| |||||||| | | ||| || || | |||||||| || |||||||||| Sbjct 738 TACAATCTGAAAAACCGGAAGGACATTACGGTTTTGTTGCCTTTATTCCGTGGCCTTTCC 797 Query 5350 AAGAGGATGGT 5360 | || |||||| Sbjct 798 AGGATGATGGT 808 >seq60362 Length=359 Score = 196 bits (216), Expect = 2e-46 Identities = 260/360 (72%), Gaps = 1/360 (0%) Strand=Plus/Minus Query 5000 TTAGGGCCACCAGAAATTGCGCACGTAGCAAAACTGGAAGGCATGAGCCACCTTGAAGTC 5059 ||||| || || || || || ||||| || || ||||| |||||||| || || Sbjct 359 TTAGGCCCGCCCGAGATAGCTCACGTGGCCAAGCTGGATAATATGAGCCATTACGACGTG 300 Query 5060 TGGACGGCCATTCAAGAAGCTGGATTGGATTCCCTGCCGGGGGCTGGTGCAGAAATATTG 5119 | || || |||| || || || ||||| | || || || ||||| || || || Sbjct 299 CTAAAAGCGATGAAAGAGGCCGGTTTAGATTCATTACCCGGCGCAGGTGCTGAGATTCTG 240 Query 5120 AACGACCGTGTCCGTATATTGATCTCTATGGGTAAATGTGGTGGTCAAGAATGGTTGGAT 5179 || ||||| || || ||||||| | || |||||||| || || |||||| ||||| Sbjct 239 AATGACCGCGTACGCCGTCTGATCTCGAAAGGGAAATGTGGCGGGCAGGAATGGCTGGAT 180 Query 5180 GTGATGCGTGCTGCCCACAAAATCAATCTTCCAACTTCGGCAACCATGATGTTTGGACAT 5239 || |||||||| || || | ||||| | ||||| |||||||||||||||||||| ||| Sbjct 179 GTAATGCGTGCAGCGCATCAGCTCAATTTGCCAACATCGGCAACCATGATGTTTGGCCAT 120 Query 5240 ATGGGAAACAATCGAAGAACGTTTCGAGCACTTGGTATGGCTTCGCGAAGTACAAAGCGA 5299 || ||||| || ||||||||||| ||||| ||||| ||| | || ||||| ||| || Sbjct 119 AT-CGAAACCATTGAAGAACGTTTTGAGCATTTGGTTTGGATCCGTGAAGTGCAATCGGA 61 Query 5300 AAAACCAGCCGATGCTTATGGATTCATCGCCTTTATCCCTTGGCCTTTCCAAGAGGATGG 5359 ||||| | | | | | || || | ||||||||||| ||||| || || || ||||| Sbjct 60 GAAACCCGAAGGTAATCACGGTTTTGTTGCCTTTATCCCGTGGCCGTTTCAGGATGATGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 21211830522668