Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_001474.2 Length=10723 Score E Sequences producing significant alignments: (Bits) Value seq3825 91.5 1e-14 >seq3825 Length=1042611 Score = 91.5 bits (100), Expect = 1e-14 Identities = 87/109 (80%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 9943 CGAACAACCTGGTCCATACATGCTAAACA-TGAATGGATGACAACGGAAGACATGCTGAC 10001 ||||| | |||||||| ||| | |||| ||||||||||||||| || |||||||| || Sbjct 957549 CGAACGTCGTGGTCCATTCAT-CAAAACTGTGAATGGATGACAACAGAGGACATGCTCAC 957607 Query 10002 AGTCTGGAACAGGGTGTGGATTCAAGAAAACCCATGGATGGAAGACAAA 10050 || ||||| | || ||||| ||||| |||||||||||| || | ||| Sbjct 957608 TGTATGGAATCGCGTTTGGATCCAAGACAACCCATGGATGAAACATAAA 957656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34196569829876