Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_001477.1 Length=10735 Score E Sequences producing significant alignments: (Bits) Value seq3825 86.0 4e-13 >seq3825 Length=1042611 Score = 86.0 bits (94), Expect = 4e-13 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 9868 CTTCCACAGGAGAGACTTGAGATTAGCGGCTAATGCTATCTGTTCAGCCGTTCCAGTTGA 9927 ||||||||| ||||||||||| |||| || ||| ||| ||||| || || Sbjct 957473 CTTCCACAGAAGAGACTTGAGGTTAGGATTCGCGGCCATCGCTTCTAGTGTTCCTGTGGA 957532 Query 9928 TTGGGTCCCAACCAGCCGCACCACCTGGTCGATCCATGCCCACCATCAATGGATGACAAC 9987 ||| |||| |||| || | ||||| || ||| || | ||||||||||||| Sbjct 957533 ATGGTTCCCTGAAGGCCGAACGTCGTGGTCCATTCATCAAAACTGTGAATGGATGACAAC 957592 Query 9988 AGAAGACATGTTGTCAGTGTGGAATAGGGTTTGGATAGAGGAAAACCCATGGATG 10042 ||| |||||| | | || |||||| | |||||||| | || |||||||||||| Sbjct 957593 AGAGGACATGCTCACTGTATGGAATCGCGTTTGGATCCAAGACAACCCATGGATG 957647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34234967774852