Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_001560.1 Length=11161 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 3e-15 >seq15 Length=2181291 Score = 93.3 bits (102), Expect = 3e-15 Identities = 120/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 6741 GAGTTTGTTGGCAAGGACAAGAGGGTGGACTGGAAGGTCTACGGCAAAAAGGATGGACTA 6800 ||| ||| ||| ||||||| || ||| | || | ||||| ||||||||||||| | Sbjct 562414 GAGCTTGCTGGAAAGGACAGTTCGGGGGATTAGAGGAACTACGACAAAAAGGATGGAGTG 562355 Query 6801 TCCTCAATCTACTGGTTATTCAAAGAGAGGCTAAAATCAGAAACACTGCTGTCAAAGTCT 6860 ||||||| || || ||||| ||||||| | || ||||| ||| ||| | || || Sbjct 562354 TCCTCAACCTTCTCGTTATAGAAAGAGAATCATGGATTAGAAATACTCTTGT-ATAGACT 562296 Query 6861 T-GGCACAAGGTGATAATCAAGTTATTTGCACACAGTATAAAA 6902 | || ||||| || |||||||| ||||| ||||| |||| || Sbjct 562295 TAAGCTCAAGGAGACAATCAAGTCATTTGTACACAATATACAA 562253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35598094821500