Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_001672.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq100 93.3 3e-15 >seq100 Length=1779872 Score = 93.3 bits (102), Expect = 3e-15 Identities = 115/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 9007 TGTGCGCACTGCGTGTACAACATGATGGGCAAGAGAGAAAAGAAACTGGG-AGAGTTCGG 9065 |||||| ||||||||||||| ||||| || | ||| ||| ||| | | || | || Sbjct 212491 TGTGCGATGTGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGACCATAGCTGGG 212550 Query 9066 AGTGGCGAAAGGAAGTCGGGCCATTTGGTACATGTGGCTGGGGAGTCGCTTTTTGGAGTT 9125 | | |||||||| ||| ||||| |||| ||||||||||| ||||| | | |||| | Sbjct 212551 -GAGCCGAAAGGATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGATATCTGGAATA 212609 Query 9126 CGAGGCTCTTGGATTCTTGAATGAAGACCATTGGG 9160 ||||| | || ||| | || ||||||||||||| Sbjct 212610 TGAGGCCTTGGGCTTCCTCAACGAAGACCATTGGG 212644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35534098246540