Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30]
4,757 sequences; 1,383,974,186 total letters
Query= NC_002031.1
Length=10862
Score E
Sequences producing significant alignments: (Bits) Value
seq100 105 5e-19
>seq100
Length=1779872
Score = 105 bits (116), Expect = 5e-19
Identities = 244/361 (68%), Gaps = 19/361 (5%)
Strand=Plus/Plus
Query 8912 GCTGTCCAAGACCCAAAGTTCTGGGAACTGGTGGATGAAGAAAGGAAGCTGCACCAACAA 8971
|| ||| | ||||| ||| |||||||| || | ||||| || || ||||
Sbjct 212425 GCCGTCAATGACCCCCGGTTTTGGGAACTAGTAAACCGGGAAAGAAAACTCCACCT---- 212480
Query 8972 GGCAGG----TGTCGGACTTGTGTGTACAACATGATGGGGAAAAGAGAGAAGAAGCTGTC 9027
||| || ||| || || |||||||||| |||||||||| ||||||| | | | |
Sbjct 212481 GGCCGGGGACTGTGCGATGTGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGAC 212540
Query 9028 -AGAGTTTGGGAAAGCAAAGGGAAGCCGTGCCATATGGTATATGTGGCTGGGAGCGCGGT 9086
| || | |||| ||||| | ||| |||| ||||||||||||||||| || |
Sbjct 212541 CATAGCTGGGGAGCCGAAAGG-ATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGAT 212599
Query 9087 ATCTTGAGTTTGAGGCCCTGGGATTCCTGAATGAGGACCATTGGGCTTCCAGGGAAAACT 9146
|||| || | ||||||| |||| ||||| || || |||||||||| || | ||||| |
Sbjct 212600 ATCTGGAATATGAGGCCTTGGGCTTCCTCAACGAAGACCATTGGGTAGCCCGTGAAAATT 212659
Query 9147 CAGGAGGAGGAGTGGAAGGCATTGGCTTACAATACCTAGGATAT--GTGATCAGAGACCT 9204
|| || |||| ||| | ||| || | ||| | || ||| | ||||| | |
Sbjct 212660 TCCCGGGCGGCGTGGGAGGTCTCGGCGTAAACTACTTTGGCTATTACTTGTCAGAAA--T 212717
Query 9205 GGCTGC-AATGGATGGTGGTGGATTCTACGCGGATGACACCGCTGGATGGGACACGCGCA 9263
||| | || ||| || ||| || ||||||| ||||| |||||||| ||||
Sbjct 212718 AGCTTCAAAAGGAAAGT----TTTTCGTTGCCGATGACATAGCTGGCTGGGACACTCGCA 212773
Query 9264 T 9264
|
Sbjct 212774 T 212774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 34641346025848
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |