Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_002640.1 Length=10649 Score E Sequences producing significant alignments: (Bits) Value seq100 80.6 2e-11 >seq100 Length=1779872 Score = 80.6 bits (88), Expect = 2e-11 Identities = 162/237 (68%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 8835 GCTGTGAATGACAGCCGGTTTTGGGAACTGGTTGACAAAGAAAGGGCCCTACACCAGGAA 8894 || || |||||| ||||||||||||||| || || ||||| || |||| || Sbjct 212425 GCCGTCAATGACCCCCGGTTTTGGGAACTAGTAAACCGGGAAAGAAAACTCCACCTGGCC 212484 Query 8895 GGGAAATGTGAATCGTGTGTCTATAACATGATGGGAAAACGTGAGAAA-AAGTTAGGAGA 8953 ||| | |||| ||| || || |||| ||||| ||| ||||| || | | | Sbjct 212485 GGGGACTGTGCGATGTGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGACCATA 212544 Query 8954 GTTTGGCAGAGCC-AAGGGAAGCCGAGCAATCTGGTACATGTGGCTGGGAGCGCGGTTTC 9012 | | || ||||| || ||| ||| | || |||| |||||||||||| || | || Sbjct 212545 GCTGGG--GAGCCGAAAGGATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGATATC 212602 Query 9013 TGGAATTTGAAGCCCTGGGTTTTTTGAATGAAGATCACTGGTTTGGCAGAGAAAATT 9069 |||||| ||| ||| |||| || | || ||||| || ||| | | | | ||||||| Sbjct 212603 TGGAATATGAGGCCTTGGGCTTCCTCAACGAAGACCATTGGGTAGCCCGTGAAAATT 212659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 33959782502524