Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_003690.1 Length=10943 Score E Sequences producing significant alignments: (Bits) Value seq3825 80.6 2e-11 >seq3825 Length=1042611 Score = 80.6 bits (88), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 9944 CAAATGTGGCTGTTGAGCTACTTCCACAGGAGGGACTTGAGGACTCTGGGGTTCGC---C 10000 || |||||| ||| || ||||||||| || ||||||||| | || ||||| | Sbjct 957453 CAGATGTGGGCTTTGTACTTCTTCCACAGAAGAGACTTGAGGT---TAGGATTCGCGGCC 957509 Query 10001 ATATGTTCGGCAGTGCCCGTGGACTGGGTCCCAACAGGAAGAACAACCTGGAGCATACAT 10060 || ||| || || ||||| ||| |||| ||| |||| | ||| ||| ||| Sbjct 957510 ATCGCTTCTAGTGTTCCTGTGGAATGGTTCCCTGAAGGCCGAACGTCGTGGTCCATTCAT 957569 Query 10061 GCAAGTGGTGCCTGGATGACAACCGAAGACATGCTGGAGGTGTGGAACCGGGTGTGGATC 10120 || ||| ||||||||||| || |||||||| || ||||| || || |||||| Sbjct 957570 CAAAACTGTGAATGGATGACAACAGAGGACATGCTCACTGTATGGAATCGCGTTTGGATC 957629 Query 10121 TATGACAACCCATTCATGGAA 10141 | |||||||||| ||| || Sbjct 957630 CAAGACAACCCATGGATGAAA 957650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34900532154436