Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_005039.1 Length=10857 Score E Sequences producing significant alignments: (Bits) Value seq100 89.7 4e-14 >seq100 Length=1779872 Score = 89.7 bits (98), Expect = 4e-14 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 9061 TGTGTGTACAACATGATGGGGAAACGAGAGAAGAAACCATCTGAATTTGGGAAAGCCAAA 9120 || |||||||||| ||||||||| ||||||| |||| | | |||| | | ||| Sbjct 212500 TGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGACCATAGCTGGGGAGCCGAAA 212559 Query 9121 GGGAGCCGAGCCATATGGTATATGTGGCTCGGAGCTCGGTTTCTTGAGTTTGAGGCACTG 9180 || ||| |||| ||||||||||||| ||| ||| | ||| || | |||||| || Sbjct 212560 GGATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGATATCTGGAATATGAGGCCTTG 212619 Query 9181 GGTTTCTTAAATGAAGATCACTGGGTCTCCCGGAAGAACTCTCTGAGCGGAGTGGAAGG 9239 || ||| | || ||||| || ||||| |||| | || | | | |||| |||| ||| Sbjct 212620 GGCTTCCTCAACGAAGACCATTGGGTAGCCCGTGAAAATTTCCCGGGCGGCGTGGGAGG 212678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34625346882108