Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_013135.1 Length=12390 Score E Sequences producing significant alignments: (Bits) Value seq58 107 2e-19 >seq58 Length=3045158 Score = 107 bits (118), Expect = 2e-19 Identities = 220/320 (69%), Gaps = 8/320 (3%) Strand=Plus/Plus Query 7611 GGGAGGTTCTTCTCTTTAATGTCTTGGGACATCCGCGACTACTTTGTCATGACTGAATAC 7670 ||||| ||||| | | ||| | ||||| | || || || || || |||| ||| || Sbjct 2382496 GGGAGATTCTTTGCCATGATGGCATGGGAGCTACGAGAGTATTTCGTGGTGACCGAACAC 2382555 Query 7671 CTCATTAAGACCCACTTTGTCCCCTTATTCAAAGGGCTGACCATGGCAGATGACCTCACA 7730 ||||| |||||||| ||||| || ||||| | ||||| || ||||| || |||| || Sbjct 2382556 CTCATCAAGACCCATTTTGTTCCGTTATTTCACGGGCTTACGATGGCCGACGACCACAAC 2382615 Query 7731 ACAGTAATTGGCAAGATA-TTGGAGAACTCTCGGGGTCAGGG---AGAGGCAGACTATGA 7786 | || || | || || || || | || | |||| ||| | | | | | Sbjct 2382616 TCTGTCATCGAGAAAATGCTTCTAGCA-TCAGACGCTCAGAATCCAGATG-ACCCCA-GC 2382672 Query 7787 GAACTTGACTATCACTGATCACATTGACTATGAAAAATGGAACAACCACCAGAGAGGGGA 7846 || | |||| | || ||||| | || ||| ||||||||||||||||||| | || || Sbjct 2382673 CAAGTAAACTA-CGCTAATCACTTGGATTATTCAAAATGGAACAACCACCAGCGCGGCGA 2382731 Query 7847 AGCCAACAATCCAATCTTCTTGGTCATGGGGAAGTTCTTGGGTTACCCGCATCTAATAGA 7906 || ||| ||||| | ||| |||||||||| | ||| |||| ||| |||| | | Sbjct 2382732 GGCTAACGATCCAGTATTCCGGGTCATGGGGCAATTCCTGGGCCTCCCAAATCTTTTGGT 2382791 Query 7907 GCGTACACATGAGATATTTG 7926 ||| ||||||||| | |||| Sbjct 2382792 GCGAACACATGAGTTTTTTG 2382811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39530684352792