Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq58 86.0 4e-13 >seq58 Length=3045158 Score = 86.0 bits (94), Expect = 4e-13 Identities = 203/304 (67%), Gaps = 2/304 (1%) Strand=Plus/Plus Query 6602 GTCATGGGACAATTCTTGGGTTATCCAAATTTGATATACCGGACACATGAGTTTTTTGAG 6661 |||||||| |||||| |||| |||||| | | || |||||||||||||||| Sbjct 2382754 GTCATGGGGCAATTCCTGGGCCTCCCAAATCTTTTGGTGCGAACACATGAGTTTTTTGGC 2382813 Query 6662 AAAAGTTTAATTTACTATAATGAAAGACCGGATCTCATGAAAGTCAGAAATGGGATCTTA 6721 || | || ||||| || || | |||||| | ||| ||| ||| || | | Sbjct 2382814 AAGTCCCTGATATACTACAAGGACCGGCCGGATTTGATGCGAGTTGAAAACGGAACGGTG 2382873 Query 6722 GAAAATAGCACACATCAGAGGGTTTGCTGGAATGGACAGGCAGGTGGTTTAGAAGGTTTG 6781 | | ||| | ||| ||| |||||||| || ||| |||| || ||||||| | Sbjct 2382874 GTGACCTCGACAGAGGAGATGGTATGCTGGAAAGGCCAGCCAGGCGGCCTAGAAGGGCTC 2382933 Query 6782 AGACAGAAAGGATGGAGTATTCTTAATTTGCTGGTCATACAGAGAGAAGCGAAAATCCGG 6841 ||||||| || |||||| | | || | || | ||| | || |||| |||||||| Sbjct 2382934 CGACAGAAGGGGTGGAGTGTGGTGAACTATCTCGGGATAGAACGACAAGCTAAAATCCGA 2382993 Query 6842 AATACCGCAGTTAAAGTG-CTAGCACAAGGCGACAATCAAGTCATATGTACACAGTACAA 6900 || | ||||| | | ||| || || || || || || || | || || ||| |||||| Sbjct 2382994 AACA-CGCAGGTCAGGTGTCTTGCTCAGGGGGATAACCAGATAATCTGCACATTGTACAA 2383052 Query 6901 GACC 6904 ||| Sbjct 2383053 AACC 2383056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35466901842832