Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025353.1 Length=11070 Score E Sequences producing significant alignments: (Bits) Value seq15 104 2e-18 >seq15 Length=2181291 Score = 104 bits (114), Expect = 2e-18 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 6683 TTGTTGGCAAGGTCAAGCTGGAGGCTTAGAGGGGCTTAGACAAAAAGGATGGAGCATCCT 6742 ||| ||| |||| || || || ||||||| || |||||||||||||||| |||| Sbjct 562410 TTGCTGGAAAGGACAGTTCGGGGGATTAGAGGAACTACGACAAAAAGGATGGAGTGTCCT 562351 Query 6743 GAATCTTCTTGTGATTCAAAGAGAAGCAAAGATTCGAAATACAGCGGTCAAGGTGCTAGC 6802 || ||||| || || |||||||| || |||| ||||||| || || ||| Sbjct 562350 CAACCTTCTCGTTATAGAAAGAGAATCATGGATTAGAAATACTCTTGTATAGACTTAAGC 562291 Query 6803 TCAGGGAGACAATCAGGTCATTTGCACGCAATATAAAACAAA 6844 ||| ||||||||||| |||||||| || ||||||| || ||| Sbjct 562290 TCAAGGAGACAATCAAGTCATTTGTACACAATATACAATAAA 562249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35306910405432