Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025358.1 Length=15024 Score E Sequences producing significant alignments: (Bits) Value seq58 93.3 4e-15 >seq58 Length=3045158 Score = 93.3 bits (102), Expect = 4e-15 Identities = 303/466 (65%), Gaps = 10/466 (2%) Strand=Plus/Plus Query 10087 CTACGAATTGGCCTGAATTTCTTAAAGCAATTAATGATCACGGACTAGATTGGGAAAAAT 10146 |||||||||||| || || || || ||| || || |||||||||||| ||| ||| Sbjct 2382392 CTACGAATTGGCGGGAGTTCCTCCAACGAATCAACGAGCACGGACTAGATCCAGAACAAT 2382451 Query 10147 TGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCTT 10206 |||| || | | | ||| ||||| |||| | || || | || ||||||||| | Sbjct 2382452 TGGTAATCGCCCTCAGAGCCAAGGAGAGAGAGATCAAGGAGAAGGGGAGATTCTTTGCCA 2382511 Query 10207 TAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATATT 10266 | ||| | | || | | || ||||| || || ||| |||| ||||||| ||| Sbjct 2382512 TGATGGCATGGGAGCTACGAGAGTATTTCGTGGTGACCGAACACCTCATCAAGACCCATT 2382571 Query 10267 TTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAGA 10326 |||| || |||||| | || || || ||||| || || || | || || |||| | Sbjct 2382572 TTGTTCCGTTATTTCACGGGCTTACGATGGCCGACGACCACAACTCTGTCATCGAGAAAA 2382631 Query 10327 TGTTGGATGTCTCAAGCGGCCAGGGAACCAGA-GA----ATATGATTATATAACTATTGC 10381 || | | ||| || || | | ||||| || | | || ||||| || Sbjct 2382632 TGCTTCTAGCATCAGACGCTCA-GAATCCAGATGACCCCAGCCAAGTA---AACTA-CGC 2382686 Query 10382 AAACAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGT 10441 || || | |||||| ||||||||| || | || | ||| |||||| |||||| Sbjct 2382687 TAATCACTTGGATTATTCAAAATGGAACAACCACCAGCGCGGCGAGGCTAACGATCCAGT 2382746 Query 10442 ATTTACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATT 10501 ||| |||||||| |||| |||| || || ||||| || |||| ||||| || Sbjct 2382747 ATTCCGGGTCATGGGGCAATTCCTGGGCCTCCCAAATCTTTTGGTGCGAACACATGAGTT 2382806 Query 10502 CTTCCAAAAAAGCTTGATTTATTATAACCAAAGGCCTGATTTAATG 10547 || || | |||| || || || | |||| ||||| ||| Sbjct 2382807 TTTTGGCAAGTCCCTGATATACTACAAGGACCGGCCGGATTTGATG 2382852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47955762153117