Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025364.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq58 125 5e-25 >seq58 Length=3045158 Score = 125 bits (138), Expect = 5e-25 Identities = 418/634 (66%), Gaps = 16/634 (3%) Strand=Plus/Plus Query 6151 ACGGACTACCTCTAGATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAA 6210 |||||||| || ||| | || || |||| | | | || |||||| ||||| | || Sbjct 2382431 ACGGACTAGATCCAGAACAATTGGTAATCGCCCTCAGAGCCAAGGAGAGAGAGATCAAGG 2382490 Query 6211 TAGCAGGT-AGATTTTTCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACA 6269 || ||| ||||| || | | ||| | ||| | | | || || || ||| | || Sbjct 2382491 -AGAAGGGGAGATTCTTTGCCATGATGGCATGGGAGCTACGAGAGTATTTCGTGGTGACC 2382549 Query 6270 GAGTACTTAATTAAGACACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGAC 6329 || || | || ||||| |||||||| || ||||||| || || || ||||| |||||| Sbjct 2382550 GAACACCTCATCAAGACCCATTTTGTTCCGTTATTTCACGGGCTTACGATGGCCGACGAC 2382609 Query 6330 -ATGACTGCAGTCATCAAAAAGATGTTGGAAAGCTCATCTGGACAAGGTTTGTTAGATTA 6388 | ||| | |||||| | || ||| | | ||| | || | |||| | Sbjct 2382610 CACAACT-CTGTCATCGAGAAAATGCTTCTAGCATCAGACGCTCAGAATCC---AGATGA 2382665 Query 6389 CTC-AGCG--GTATGCCTGGCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCG 6445 | | ||| ||| | || || || | |||||| |||||||||||| |||||||| Sbjct 2382666 CCCCAGCCAAGTAAACTACGCTAATCACTTGGATTATTCAAAATGGAACAACCACCAGCG 2382725 Query 6446 AAAATTGTCAAACGGTCCTGTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCT 6505 | | |||| ||| || ||| ||||||||| |||||||| || | || ||||| Sbjct 2382726 CGGCGAGGCTAACGATCCAGTATTCCGGGTCATGGGGCAATTCCTGGGCCTCCCAAATCT 2382785 Query 6506 AATATACAGAACTCATGAATTTTTTGAGAAAAGCCTAATATATTACAATGGCAGGCCTGA 6565 | |||| ||||| ||||||| || ||| ||||| ||||| | | |||| || Sbjct 2382786 TTTGGTGCGAACACATGAGTTTTTTGGCAAGTCCCTGATATACTACAAGGACCGGCCGGA 2382845 Query 6566 TCTCATGAGAGTCAAAGATGACACTGTTGAAAATGCAGGCACCACTCA-GGTGTGCTGGA 6624 | | ||| |||| || | | || || | | | | || | ||| ||||||| Sbjct 2382846 TTTGATGCGAGTTGAAAACGGAACGGTGGTGACCTC-GACAGAGGAGATGGTATGCTGGA 2382904 Query 6625 ATGGGCAGGCAGGAGGCTTGGAAGGTCTTCGTCAAAAGGGTTGGAGTATTCTAAATCTAT 6684 | || ||| |||| ||| | ||||| || || || ||||| |||||| | | || |||| Sbjct 2382905 AAGGCCAGCCAGGCGGCCTAGAAGGGCTCCGACAGAAGGGGTGGAGTGTGGTGAA-CTAT 2382963 Query 6685 -TAGTGATTCAAAGGGAGGCTAAAATTCGAAATACTGCAGTGAAAGTAT-TGGCTCAGGG 6742 | | ||| || | | |||||||| ||||| || |||| | || | | |||||||| Sbjct 2382964 CTCGGGATAGAACGACAAGCTAAAATCCGAAACAC-GCAGGTCAGGTGTCTTGCTCAGGG 2383022 Query 6743 AGACAATCAAGTCATTTGCACTCAGTATAAGACC 6776 || || || | || ||||| ||| || ||| Sbjct 2383023 GGATAACCAGATAATCTGCACATTGTACAAAACC 2383056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35143719139284