Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025371.1 Length=11082 Score E Sequences producing significant alignments: (Bits) Value seq58 116 3e-22 >seq58 Length=3045158 Score = 116 bits (128), Expect = 3e-22 Identities = 331/495 (67%), Gaps = 14/495 (3%) Strand=Plus/Plus Query 6308 AAAGAGAGAGAGTTAAAGATCGCCGGAAGGTTCTTTTCACTGATGTCTTGGCAGTTGAGA 6367 || ||||||||| | ||| || || |||||| | ||||| | ||| || | || Sbjct 2382472 AAGGAGAGAGAGATCAAGGAGAAGGGGAGATTCTTTGCCATGATGGCATGGGAGCTACGA 2382531 Query 6368 GAGTACTTTGTGATAACGGAATATCTGATTAAGACCCATTATGTTCCACTATTTAAAGGA 6427 ||||| || ||| | || ||| | || || |||||||||| |||||| ||||| | || Sbjct 2382532 GAGTATTTCGTGGTGACCGAACACCTCATCAAGACCCATTTTGTTCCGTTATTTCACGGG 2382591 Query 6428 TTGACTATGGCAGATGACCTCACATCAGTCGTGAAGAAGATGTTGGACAACA-CAAACGG 6486 | || ||||| || |||| || || ||| | |||| ||| | | || || ||| Sbjct 2382592 CTTACGATGGCCGACGACCACAACTCTGTCATCGAGAAAATGCTTCT-AGCATCAGACGC 2382650 Query 6487 ACAAGGATT-AGACGACTATTCATCGATTTGTA-TA-GCGAATCACATTGATTACGAAAA 6543 || | || ||| ||| || | | | | || || |||||| | ||||| ||| Sbjct 2382651 TCA-GAATCCAGATGACCC--CAGCCAAGTAAACTACGCTAATCACTTGGATTATTCAAA 2382707 Query 6544 ATGGAACAATCATCAGAGGAAAGAGTCAAATGGACCGGTCTTTCGCGTCATGGGACAATT 6603 ||||||||| || ||| | ||| | || | || || || || |||||||| ||||| Sbjct 2382708 ATGGAACAACCACCAGCGCGGCGAGGCTAACGATCCAGTATTCCGGGTCATGGGGCAATT 2382767 Query 6604 TTTGGGATATCCCCGGCTGTTTGAGAGAACTCACGAGTTCTTTG--AATCCAGCCTCATT 6661 |||| || || || | | |||| || ||||| |||| || | ||| || Sbjct 2382768 CCTGGGCCTCCCAAATCTTTTGGTGCGAACACATGAGTTTTTTGGCAAGTC--CCTGATA 2382825 Query 6662 TACTACAATGGCAGACCAGATTTGATG-GATGTGAGGGGAGATTCTTTGGTCAACACCAC 6720 |||||||| | | | || ||||||||| || ||| || | |||| | | | || Sbjct 2382826 TACTACAAGGACCGGCCGGATTTGATGCGAGTTGAAAACGGA-ACGGTGGTGACCTCGAC 2382884 Query 6721 AGAAAAGCTGGTTTGTTGGGAAGGCCAAGCAGGAGGGCTAGAAGGATTGAGGCAAAAAGG 6780 ||| || |||| || ||| ||||||| |||| || |||||||| | | || || || Sbjct 2382885 AGAGGAGATGGTATGCTGGAAAGGCCAGCCAGGCGGCCTAGAAGGGCTCCGACAGAAGGG 2382944 Query 6781 ATGGAGCGTGTTGAA 6795 ||||| ||| |||| Sbjct 2382945 GTGGAGTGTGGTGAA 2382959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35345308350408