Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025378.1 Length=11202 Score E Sequences producing significant alignments: (Bits) Value seq58 158 9e-35 >seq58 Length=3045158 Score = 158 bits (174), Expect = 9e-35 Identities = 396/596 (66%), Gaps = 22/596 (4%) Strand=Plus/Plus Query 6353 AAAGAGAGAGAATTAAAATTGATTGGGCGTTTCTTTTCTCTCATGTCTTGGAAATTGAGA 6412 || |||||||| | || || ||| | |||||| | | ||| | ||| | | || Sbjct 2382472 AAGGAGAGAGAGATCAAGGAGAAGGGGAGATTCTTTGCCATGATGGCATGGGAGCTACGA 2382531 Query 6413 GAATACTTCGTCATAACCGAGCACCTAATTAAGACTCACTTTGTCCCTCTGTTCCACGGA 6472 || || ||||| | ||||| ||||| || ||||| || ||||| || | || ||||| Sbjct 2382532 GAGTATTTCGTGGTGACCGAACACCTCATCAAGACCCATTTTGTTCCGTTATTTCACGGG 2382591 Query 6473 CTTACGATGGCAGATGATCTCACATCAGTGATCAAGAAGATGATGGACAGTTCCTCGGGG 6532 ||||||||||| || || | || || || ||| |||| ||| | || | Sbjct 2382592 CTTACGATGGCCGACGACCACAACTCTGTCATCGAGAAAATGCTT--------CTAGCAT 2382643 Query 6533 CAGGGGTTGA-----CAGATTACTC-AGCT--GTATGCATAGCCAATCATATCGACTACG 6584 ||| | | | ||||| || | ||| ||| | || ||||| | || || Sbjct 2382644 CAGACGCTCAGAATCCAGATGACCCCAGCCAAGTAAACTACGCTAATCACTTGGATTATT 2382703 Query 6585 AAAAATGGAACAATCACCAGCGGAAAGAATCCAATGGGCCGGTATTCCGAGTAATGGGCC 6644 |||||||||||| |||||||| || | || | || |||||||| || ||||| | Sbjct 2382704 CAAAATGGAACAACCACCAGCGCGGCGAGGCTAACGATCCAGTATTCCGGGTCATGGGGC 2382763 Query 6645 AATTCTTGGGCTTCCCCAATCTGATATCCAGAACGCACGAATTCTTTGAGAAAAGTTTGG 6704 ||||| ||||| |||| ||||| | |||| || || || |||| || || Sbjct 2382764 AATTCCTGGGCCTCCCAAATCTTTTGGTGCGAACACATGAGTTTTTTGGCAAGTCCCTGA 2382823 Query 6705 TTTATTACAATGGCCGGCCAGATTTGATGAGAGT--ATCGGGGAATTCTTTGACAAACAC 6762 | || ||||| | |||||| ||||||||| |||| | |||| | || | | | Sbjct 2382824 TATACTACAAGGACCGGCCGGATTTGATGCGAGTTGAAAACGGAA--CGGTGGTGACCTC 2382881 Query 6763 GACCAACCTGAGGGTTTGCTGGGAGGGCCAAGCCGGCGGTCTGGAAGGTTTGCGGCAGAA 6822 ||| | || ||| |||||| | ||||| | ||||| || ||||| | || ||||| Sbjct 2382882 GACAGAGGAGATGGTATGCTGGAAAGGCCAGCCAGGCGGCCTAGAAGGGCTCCGACAGAA 2382941 Query 6823 GGGATGGAGCATTTTGAACCTACTGGTGATTCAAAGAGAAGCCAAAATCCGGAACACCTC 6882 ||| ||||| | ||||| || | ||| || || |||| |||||||| |||| | | Sbjct 2382942 GGGGTGGAGTGTGGTGAACTATCTCGGGATAGAACGACAAGCTAAAATCCGAAACA-CGC 2383000 Query 6883 AGTGAAAGT-TCTAGCACAGGGAGACAATCAGGTGATCTGTACCCAGTACAAAACC 6937 || | || ||| || ||||| || || ||| | ||||| || |||||||||| Sbjct 2383001 AGGTCAGGTGTCTTGCTCAGGGGGATAACCAGATAATCTGCACATTGTACAAAACC 2383056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35729287800168