Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025384.1 Length=11190 Score E Sequences producing significant alignments: (Bits) Value seq58 127 1e-25 >seq58 Length=3045158 Score = 127 bits (140), Expect = 1e-25 Identities = 352/533 (66%), Gaps = 20/533 (4%) Strand=Plus/Plus Query 6267 TGGTTATTGCCTTGAGGGTGAAAGAGAGAGAGATTAAGGACATCGGACGCTTCTTCGCGC 6326 |||| || ||| | || | || ||||||||||| ||||| | || | ||||| || Sbjct 2382452 TGGTAATCGCCCTCAGAGCCAAGGAGAGAGAGATCAAGGAGAAGGGGAGATTCTTTGCCA 2382511 Query 6327 TCATGAGTTGGATGGTGCGGGAGTACTTTGTTATCACAGAATATCTCATCAAAGAG---T 6383 | ||| ||| | | || ||||| || || | || ||| | |||||||| || | Sbjct 2382512 TGATGGCATGGGAGCTACGAGAGTATTTCGTGGTGACCGAACACCTCATCAA-GACCCAT 2382570 Query 6384 TCTACCTCCCCCTCTTCTCCGGACTCACCATGGCGGATGACTTCAACACAGTCACCGACA 6443 | | | || | || ||| || || ||||| || ||| |||| | |||| ||| | Sbjct 2382571 TTTG--TTCCGTTATTTCACGGGCTTACGATGGCCGACGACCACAACTCTGTCATCGAGA 2382628 Query 6444 AAATGCTGAAGTGCAGC-GACGGACAAGGGACAAATGACTACAAAACTGTGACCATTGCC 6502 ||||||| ||| | |||| || || ||||| || || | | || Sbjct 2382629 AAATGCTTCTA-GCATCAGACGCTCAGAATCCAGATGACCCCAGCCAAGTAAACTACGCT 2382687 Query 6503 AACCACCTGGACTACACTAAATGGAACAACCACCAGCGGGCAGAAGCAAACAATCCGGTA 6562 || ||| |||| || | |||||||||||||||||||| | || || ||| |||| ||| Sbjct 2382688 AATCACTTGGATTATTCAAAATGGAACAACCACCAGCGCGGCGAGGCTAACGATCCAGTA 2382747 Query 6563 TTCAAAGTGATGGGGCAATTCCTGGGGTACCCCAATCTATTCACCAGGTCCCACGAGATC 6622 ||| || ||||||||||||||||| ||| ||||| || | | || ||| | Sbjct 2382748 TTCCGGGTCATGGGGCAATTCCTGGGCCTCCCAAATCTTTTGGTGCGAACACATGAGTTT 2382807 Query 6623 TTCCAGAAGTCACTGATCTATTACAAGGACAGGCCGGACCTGATGCAGGTGGTCGAGGGG 6682 || ||||| ||||| || ||||||||| ||||||| |||||| || | | || Sbjct 2382808 TTTGGCAAGTCCCTGATATACTACAAGGACCGGCCGGATTTGATGCGAGTTGAAAACGGA 2382867 Query 6683 CGTGTGGTGA-----ACA-AGGAGGGCTCCTTCGTCTGCTGGAATGGTCAGGACGGGGGA 6736 ||||||| ||| ||||| | || |||||||| || ||| || || Sbjct 2382868 ACGGTGGTGACCTCGACAGAGGAG------ATGGTATGCTGGAAAGGCCAGCCAGGCGGC 2382921 Query 6737 CTGGAGGGCTTGCGGCAGAAGGGCTGGACAATCATGAACTACCTAGCGATAGA 6789 || || || | || |||||||| |||| | ||||||| || | |||||| Sbjct 2382922 CTAGAAGGGCTCCGACAGAAGGGGTGGAGTGTGGTGAACTATCTCGGGATAGA 2382974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35690889855192