Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025392.1 Length=11121 Score E Sequences producing significant alignments: (Bits) Value seq58 149 4e-32 >seq58 Length=3045158 Score = 149 bits (164), Expect = 4e-32 Identities = 373/562 (66%), Gaps = 6/562 (1%) Strand=Plus/Plus Query 6203 CTACCAACTGGTTGGAATTCCTGGAAATGATCGACAAACATGGACTGGATGATGATGATT 6262 |||| || ||| ||| ||||| || ||| || | || ||||| ||| || | | Sbjct 2382392 CTACGAATTGGCGGGAGTTCCTCCAACGAATCAACGAGCACGGACTAGATCCAGAACAAT 2382451 Query 6263 TGATAATCGGACTCAAAGGAAAAGAGAGAGAATTGAAGATTGCAGGTAGATTCTTTTCAT 6322 || |||||| |||| || || |||||||| | ||| || ||||||||| | Sbjct 2382452 TGGTAATCGCCCTCAGAGCCAAGGAGAGAGAGATCAAGGAGAAGGGGAGATTCTTTGCCA 2382511 Query 6323 TGATGTCATGGAAATTGCGAGAATATTTTGTGATAACCGAATATCTGATCAAAACGCATT 6382 ||||| ||||| | | ||||| ||||| ||| | |||||| | || ||||| || |||| Sbjct 2382512 TGATGGCATGGGAGCTACGAGAGTATTTCGTGGTGACCGAACACCTCATCAAGACCCATT 2382571 Query 6383 TTGTCCCTCTCTTTTATGGACTCACCATGGCTGATGATATGACTTCAGTCATCAAGAAAA 6442 |||| || | ||| | || || || ||||| || || | || |||||| |||||| Sbjct 2382572 TTGTTCCGTTATTTCACGGGCTTACGATGGCCGACGACCACAACTCTGTCATCGAGAAAA 2382631 Query 6443 TGCTAGAAAGTTCATCCGGTCAAGGGTTGA-ATGACTATTCTGCAATCTCAAT--CGCAA 6499 |||| | ||| || ||| | | | ||||| | || | | || ||| | Sbjct 2382632 TGCTTCTAGCATCAGACGCTCA-GAATCCAGATGACCC--CAGCCAAGTAAACTACGCTA 2382688 Query 6500 ATCACATAGATTATGAGAAATGGAACAATCACCAGAGAAGAACATCAAACGAACCTGTAT 6559 ||||| | |||||| ||||||||||| |||||| | | | ||||| || |||| Sbjct 2382689 ATCACTTGGATTATTCAAAATGGAACAACCACCAGCGCGGCGAGGCTAACGATCCAGTAT 2382748 Query 6560 TCAAAGTGATGGGACAATTTCTGGGATATCCAAATTTGATATCACGCACCCATGAATTCT 6619 || || ||||| ||||| ||||| |||||| | | || || ||||| || | Sbjct 2382749 TCCGGGTCATGGGGCAATTCCTGGGCCTCCCAAATCTTTTGGTGCGAACACATGAGTTTT 2382808 Query 6620 TTGAGAAGAGTTTGATTTATTATAATGGAAGACCCGATTTGATGAGAGTCCGGAATGGAG 6679 ||| ||| |||| || || || | | || ||||||||| |||| || ||| Sbjct 2382809 TTGGCAAGTCCCTGATATACTACAAGGACCGGCCGGATTTGATGCGAGTTGAAAACGGAA 2382868 Query 6680 TGGTTGAGAATTCCTCAGATACTAGAGTATGTTGGAATGGACAAGCCGGGGGTCTAGAGG 6739 ||| | || || |||| | ||||| ||||| || || | || || ||||| | Sbjct 2382869 CGGTGGTGACCTCGACAGAGGAGATGGTATGCTGGAAAGGCCAGCCAGGCGGCCTAGAAG 2382928 Query 6740 GTTTGAGACAGAAGGGCTGGAG 6761 | | |||||||||| ||||| Sbjct 2382929 GGCTCCGACAGAAGGGGTGGAG 2382950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35470101671580