Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025405.1 Length=11124 Score E Sequences producing significant alignments: (Bits) Value seq58 91.5 1e-14 >seq58 Length=3045158 Score = 91.5 bits (100), Expect = 1e-14 Identities = 208/307 (68%), Gaps = 7/307 (2%) Strand=Plus/Plus Query 6303 AGAGCAAAGGAGAGAGAGTTGAAGAACAAAGGACGATTCTTTGCACTGATGTCTTGGAGA 6362 ||||| |||||||||||| | ||| | || || |||||||||| ||||| | ||| Sbjct 2382466 AGAGCCAAGGAGAGAGAGATCAAGGAGAAGGGGAGATTCTTTGCCATGATGGCATGGGAG 2382525 Query 6363 CTTAGAGAATATTTTGTGGTCACAGAATATTTGATCAAAAAGCA-TTACATCCCTTTGTT 6421 || |||| ||||| ||||| || ||| | | ||||| | || || ||| || || Sbjct 2382526 CTACGAGAGTATTTCGTGGTGACCGAACACCTCATCAAGACCCATTTTGTTCCGTTATTT 2382585 Query 6422 CAAAGGCTTGACCATGGCGGATGATCTAAATACAGTAATAGAAAAGATGATTCAGAGCA- 6480 || ||||| || ||||| || || | || | || || || || ||| ||| |||| Sbjct 2382586 CACGGGCTT-ACGATGGCCGACGACCACAACTCTGTCATCGAGAAAATGCTTC-TAGCAT 2382643 Query 6481 CAAGCGGTCATGATAGAGAAGATAGCCGAAGACTTGTCACCGTCTGCAACCATTTGGATT 6540 || || ||| || ||| || || || | || | | | || || ||||||| Sbjct 2382644 CAGACGCTCAGAATCCAGATGA---CCCCAGCCAAGTAAACTACGCTAATCACTTGGATT 2382700 Query 6541 ATGAAAAATGGAACAACAATCAAAGGGATGAGTCAAACCATGCGGTATTCAAAGTGATGG 6600 || ||||||||||||| | || | | ||| | ||| || | |||||| || |||| Sbjct 2382701 ATTCAAAATGGAACAACCACCAGCGCGGCGAGGCTAACGATCCAGTATTCCGGGTCATGG 2382760 Query 6601 GCCAATT 6607 | ||||| Sbjct 2382761 GGCAATT 2382767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35479701157824