Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq15 82.4 5e-12 >seq15 Length=2181291 Score = 82.4 bits (90), Expect = 5e-12 Identities = 131/187 (70%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 6750 AGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTGAGACAAAAAGGTTGGAGTAT 6809 || ||||||||| || || ||||| ||||||| ||| |||||||||| |||||| | Sbjct 562413 AGCTTGCTGGAAAGGACAGTTCGGGGGATTAGAGGAACTACGACAAAAAGGATGGAGTGT 562354 Query 6810 ACTCAACTTGTTGGTGATTAGACGTGAGTCCAAAATCCGCAATACAAGGGTTCAGACATT 6869 |||||| | | || || | | || || || | ||||| || |||| | Sbjct 562353 CCTCAACCTTCTCGTTATAGAAAGAGAATCATGGATTAGAAATACTCTTGTATAGACTTA 562294 Query 6870 AGCACAGGGAGACAATCAAGTGATCTGTACACAGTACAGATTACAACCTACTAGGAATGA 6929 ||| || |||||||||||||| || |||||||| || | | || | || ||| ||| | Sbjct 562293 AGCTCAAGGAGACAATCAAGTCATTTGTACACAATATACAATAAATCCATCTA--AATCA 562236 Query 6930 GGATGAG 6936 | ||||| Sbjct 562235 GCATGAG 562229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35534098246540