Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027709.1 Length=10870 Score E Sequences producing significant alignments: (Bits) Value seq100 95.1 8e-16 >seq100 Length=1779872 Score = 95.1 bits (104), Expect = 8e-16 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 9016 TGCGTGTACAACATGATGGGAAAGAGAGAGAAGAAACTGGG-AGAGTTTGGAGTGGCAAA 9074 ||||||||||||| ||||| || | ||||||| ||| | | || | || | | | || Sbjct 212500 TGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGACCATAGCTGGG-GAGCCGAA 212558 Query 9075 AGGCAGCCGGGCCATCTGGTACATGTGGCTGGGGAGTCGCTTTCTAGAGTTTGAGGCCCT 9134 ||| |||| |||| |||| ||||||||||| ||||| | ||| || | ||||||| | Sbjct 212559 AGGATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGATATCTGGAATATGAGGCCTT 212618 Query 9135 CGGATTCCTAAATGAGGACCATTGGG 9160 || ||||| || || |||||||||| Sbjct 212619 GGGCTTCCTCAACGAAGACCATTGGG 212644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34666944655832