Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_027999.1 Length=10761 Score E Sequences producing significant alignments: (Bits) Value seq3825 78.8 6e-11 >seq3825 Length=1042611 Score = 78.8 bits (86), Expect = 6e-11 Identities = 146/209 (70%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 10013 GCAGATGTGGAGCCTTTTGTATTTC---CATAGGAGAGACTTGAGGCT-GTTGTCGAATG 10068 |||||||||| || |||||| ||| || || |||||||||||| | | ||| | Sbjct 957452 GCAGATGTGG-GC--TTTGTACTTCTTCCACAGAAGAGACTTGAGGTTAGGATTCGCG-G 957507 Query 10069 CCATAGGCTCAAGCGTGCCAGTCGATTGGGTGCCTTCAGGAAGAACCACTTGGTCAATCC 10128 |||| | || || || || || || ||| | ||| ||| |||| | ||||| || | Sbjct 957508 CCATCGCTTCTAGTGTTCCTGTGGAATGGTTCCCTGAAGGCCGAACGTCGTGGTCCATTC 957567 Query 10129 ACACGAAAGGAGAATGGATGACTTCTAGCAACATGCTGGATGTATGGAACAGGGTGTGGA 10188 | || | ||||||||||| | ||||||| ||||||||| | || |||| Sbjct 957568 ATCAAAACTGTGAATGGATGACAACAGAGGACATGCTCACTGTATGGAATCGCGTTTGGA 957627 Query 10189 TCCAAGACAACCCACACATGAAAGACAAA 10217 |||||||||||||| |||||| | ||| Sbjct 957628 TCCAAGACAACCCATGGATGAAACATAAA 957656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34318163322300