Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_028236.1 Length=11072 Score E Sequences producing significant alignments: (Bits) Value seq58 105 5e-19 >seq58 Length=3045158 Score = 105 bits (116), Expect = 5e-19 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 6242 AAGGAGAGAGAAGTCAAAGTAAAAGGAAGATTCTTTTCCCTGATGTCTTGGAAGCTGAGA 6301 ||||||||||| |||| | || || ||||||||| || ||||| | ||| |||| || Sbjct 2382472 AAGGAGAGAGAGATCAAGGAGAAGGGGAGATTCTTTGCCATGATGGCATGGGAGCTACGA 2382531 Query 6302 GAGTATTTCGTGGTGACGGAGTACTTGATAAAGGAGCATTACGTTCCTTTATTTAATGGG 6361 ||||||||||||||||| || || | || ||| |||| ||||| |||||| | ||| Sbjct 2382532 GAGTATTTCGTGGTGACCGAACACCTCATCAAGACCCATTTTGTTCCGTTATTTCACGGG 2382591 Query 6362 CTGACAATGGCTGATGAC 6379 || || ||||| || ||| Sbjct 2382592 CTTACGATGGCCGACGAC 2382609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35313310062928