Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_028246.1 Length=14627 Score E Sequences producing significant alignments: (Bits) Value seq15 84.2 2e-12 >seq15 Length=2181291 Score = 84.2 bits (92), Expect = 2e-12 Identities = 114/157 (73%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 10199 TTGCTGGGAAGGACAAAAAGGAGGATTAGAGGGTCTAAGACAAAAAGGATGGAGTGTCCT 10258 ||||||| ||||||| || |||||||||| ||| |||||||||||||||||||||| Sbjct 562410 TTGCTGGAAAGGACAGTTCGGGGGATTAGAGGAACTACGACAAAAAGGATGGAGTGTCCT 562351 Query 10259 TAATTGCCTAATGATTGAGAGAGAATCAAAGATTCGGAACACCC--AAATCGGCTTATTG 10316 || || | || || ||||||||| |||| | || || | || | |||| Sbjct 562350 CAACCTTCTCGTTATAGAAAGAGAATCATGGATTAGAAATACTCTTGTATAGACTTA--A 562293 Query 10317 GCCCAGGGAGACAACCAAGTAATCACAACACATTATA 10353 || || |||||||| ||||| || ||||| |||| Sbjct 562292 GCTCAAGGAGACAATCAAGTCATTTGTACACAATATA 562256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 46685432028690