Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_030289.1 Length=10206 Score E Sequences producing significant alignments: (Bits) Value seq100 80.6 2e-11 >seq100 Length=1779872 Score = 80.6 bits (88), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 8776 GACCCACGGTTCTGGGCTCTAGTTGATAGAGAAAGACAGGTCCATCTGGAAGGGAGATGT 8835 ||||| ||||| |||| ||||| | | |||||| | |||| |||| ||| ||| Sbjct 212434 GACCCCCGGTTTTGGGAACTAGTAAACCGGGAAAGAAAACTCCACCTGGCCGGGGACTGT 212493 Query 8836 GAGACATGCATTTACAACATGATGGGAAAGAGAGAGAAAAAACCAGCCG-AGTTCGGCAA 8894 | || ||| | ||||||| ||||| || | |||||| |||| || || | || | Sbjct 212494 GCGATGTGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGACCATAGCTGGGGA- 212552 Query 8895 GGCCAAAGGTAGTAGAGCCATCTGGTACATGTGGTTGGGAGCAAGATTCCTTGAATTTGA 8954 | | ||||| | |||| |||| |||||| ||||| ||| || |||| ||| Sbjct 212553 GCCGAAAGGATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGATATCTGGAATATGA 212612 Query 8955 AGCCTTGGGATTTTTGAATGAAGACCATTGG 8985 |||||||| || | || |||||||||||| Sbjct 212613 GGCCTTGGGCTTCCTCAACGAAGACCATTGG 212643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32542258367160