Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031214.1 Length=13732 Score E Sequences producing significant alignments: (Bits) Value seq130 82.4 7e-12 >seq130 Length=3389925 Score = 82.4 bits (90), Expect = 7e-12 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 8067 AAAACAATGAGGGCATTTGAGAACATGCTTGTGTATTATGATGACGGCATTGTAAAACGT 8126 ||||| ||| || ||||||| |||||||||||||| || || ||| | | Sbjct 249016 AAAACTATGCTAGCTTTTGAGAGGATGCTTGTGTATTACGACGATCGCACCTATCGAGTT 249075 Query 8127 CATTGGGTGGGACAAAAAGGAGGCATCGAAGGTCTTAACCAAGCAACATGGACATTTACA 8186 | |||| || ||| ||| || | |||||| | |||||||| |||||||| || | Sbjct 249076 TACTGGGATGGGCAATTAGGCGGATTGGAAGGTTTGAACCAAGCCACATGGACTTTCATG 249135 Query 8187 TTTCTGGGGGGTCTTAAAGACGCTTTGGAGAGCTTAGGGTATGTGTATCACATTACTGTA 8246 ||||||| || | || || | ||||||| | || || ||||| || || ||| Sbjct 249136 TTTCTGGCCGGATTGAAGGAGTCGTTGGAGAAAATCGGATACCGCTATCATATAACAGTA 249195 Query 8247 AAGGGGGATGATGTACGA 8264 || ||||||||||| ||| Sbjct 249196 AAAGGGGATGATGTTCGA 249213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 43821589556745