Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031244.1 Length=12774 Score E Sequences producing significant alignments: (Bits) Value seq196 78.8 8e-11 >seq196 Length=5167134 Score = 78.8 bits (86), Expect = 8e-11 Identities = 105/146 (72%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 4806 TTATCACCAATGGAATTTGCCTTTACATATGGCGGATCTGGACACACAGCTATTGCAAGA 4865 |||||||| ||||||||||| |||||| || || | || || ||||| ||||||| Sbjct 3422322 TTATCACCTCAGGAATTTGCCTATACATACGGGGGTCCAGGCCATACAGCCGTTGCAAGG 3422381 Query 4866 GGTGAGGTAATTTATCTAGCTAAATGTTCACCTACTTCAGTCATACCTGATGTGAATAGA 4925 || || || ||||| || || |||||| |||| | | ||||| || ||| | ||| Sbjct 3422382 GGAGAAGTGATTTACCTTGCCAAATGTAGACCTGTTGCCGTCATCCCCGATCTCAATTTC 3422441 Query 4926 ACAGGTTGTTACAATGAGATTCCAGT 4951 || || || |||| ||| | || || Sbjct 3422442 ACTGGGTGCCACAACGAGTTGCCTGT 3422467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40759418592024