Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031302.1 Length=11370 Score E Sequences producing significant alignments: (Bits) Value seq58 87.8 1e-13 >seq58 Length=3045158 Score = 87.8 bits (96), Expect = 1e-13 Identities = 228/342 (67%), Gaps = 8/342 (2%) Strand=Plus/Plus Query 6465 GGCAGATTCTTTGCCTTGATGTCCTGGGAAATAAGGGATTATTTTGTAATGACTGAGTAC 6524 || |||||||||||| ||||| | ||||| || | || ||||| || |||| || || Sbjct 2382496 GGGAGATTCTTTGCCATGATGGCATGGGAGCTACGAGAGTATTTCGTGGTGACCGAACAC 2382555 Query 6525 TTGATTAAAACACACTTTGTTCCTCTATTTGATGGACTCACAATGGCAGATGACTTAACA 6584 | || || || || |||||||| ||||| | || || || ||||| || ||| ||| Sbjct 2382556 CTCATCAAGACCCATTTTGTTCCGTTATTTCACGGGCTTACGATGGCCGACGAC--CACA 2382613 Query 6585 A--CGGTAATCGGGAAAATTCTTCGAAACACGGAAGGACAAGGAGATACAT--CCTATGA 6640 | | || |||| |||||| |||| | | || | | || | | || || | Sbjct 2382614 ACTCTGTCATCGAGAAAATGCTTCTAGCATCAGACGCTC-AGAATCCAGATGACCCCAGC 2382672 Query 6641 AAATGTGACTTTTGCTGATCATATTGATTATGAAAAATGGAATAATCACCAAAGAGCAGA 6700 || || | | ||| |||| | |||||| ||||||||| || ||||| | | || Sbjct 2382673 CAA-GTAAACTACGCTAATCACTTGGATTATTCAAAATGGAACAACCACCAGCGCGGCGA 2382731 Query 6701 GGGAAACAACCCTACCTTCAGGGTTATGGGTCAATTTTTAGGGTACCCAAATTTGATTGA 6760 || ||| | || ||| |||| ||||| ||||| | || ||||||| | | | Sbjct 2382732 GGCTAACGATCCAGTATTCCGGGTCATGGGGCAATTCCTGGGCCTCCCAAATCTTTTGGT 2382791 Query 6761 AAGAACACATGAAATCTTTGAAAAATCTTGGATATACTATAA 6802 |||||||||| | |||| || || ||||||||| || Sbjct 2382792 GCGAACACATGAGTTTTTTGGCAAGTCCCTGATATACTACAA 2382833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36266859029832