Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031303.1 Length=13706 Score E Sequences producing significant alignments: (Bits) Value seq46 98.7 9e-17 >seq46 Length=5177111 Score = 98.7 bits (108), Expect = 9e-17 Identities = 444/693 (64%), Gaps = 28/693 (4%) Strand=Plus/Plus Query 8458 TGTGACTAACATGGATTTTGTCAAATGGAATTCGAATATGCGAGAAGAAGAAACCGGCCC 8517 ||| || |||||||| ||||| || ||||| || || |||||||| |||||||| | | Sbjct 142733 TGTCACAAACATGGACTTTGTTAAGTGGAACTCCAACATGCGAGAGGAAGAAACTGAGC- 142791 Query 8518 CTTGTTCAAAGATATCGACCATCTCTTCGGATTTGAAAATCTGGTGTCACGGACTTACGA 8577 ||| |||| | || || | || || ||| ||| | | | |||||||| | Sbjct 142792 ----TTCTGAGATTTGGATCACATGTTTGGTTTTTCTAATGTATTTCAAAGGACTTACAA 142847 Query 8578 AATGTTTAGAGAGTCTCAAATGTACTTGGCCAACGGTCATGTGTTGCCCGAAATTTCGAG 8637 ||||| || |||||||||||||||| | | | | | | || ||||| Sbjct 142848 GATGTTCTCTGAAGCTCAAATGTACTTGGCAAGCCCTTACATAATTCCAGAAATAAGTGA 142907 Query 8638 AGACGGG-TCACAACTGGAAACTGGACCCACGGTCTGGAGTCGCCACCTGGGAGGAGTGG 8696 ||| || || | || |||| || ||||||| | || ||||||| | | Sbjct 142908 AGATGGACTCTCT-CTC-AAAC----CCTTATGTCTGGAATGATCATGTGGGAGGGATTG 142961 Query 8697 AGGGACTTCGTCAGAAAGGTTGGACATTATTCACC---GTGTCTTTGATCAAAAGGGTCG 8753 |||||||||| | |||||| ||||| | |||||| ||| | ||| | | | | Sbjct 142962 AGGGACTTCGACCGAAAGGGTGGACCATTTTCACCATAGTGGCCCTGA--AGTACGTT-- 143017 Query 8754 CACGCATTCTCGGGCTGAA----CTGCACACTTATGGGACAAGGAGACAATCAAGTGCTG 8809 ||| || || ||| ||| | | ||||| ||||||||||| || ||| || Sbjct 143018 -ACGGATAGGGAGG--GAATAGTCTGTAATTTGATGGGTCAAGGAGACAACCAGGTGATG 143074 Query 8810 GTCACGACCTACTCATGTGACTCAAAACGAAGCTT-CTCTGAACAGCATGAGGAATTCAT 8868 |||| || ||| ||| | | | | ||| ||| || ||||||| | || | Sbjct 143075 GTCATAACATAC-CATAAAAGAGAGGATTTAACTTTCTCACAATAGCATGAAAACTTTCT 143133 Query 8869 AAACACCCTAACCCGGTGTCTGGCGAGCATTGGCCCCCCTTTGAAACCGGAAGAAACCTG 8928 || |||| || || |||||||| ||| | ||||||||||| || || Sbjct 143134 CAATTCCCTGACTACACTCCTTCAACTGATTGGCCCTCCTCTAAAACCGGAAGAGACTTG 143193 Query 8929 GTCATCCTCCCACTTATTTTCATACGGAAAGTACGCCGTGTGGAAGGGAGCACCACTTAG 8988 | | |||||||| || ||| | || || |||| | || | ||||| | ||| | | Sbjct 143194 GACCTCCTCCCATTTTTTTGCTTATGGGAAGTTTCCAGTTTTTAAGGGGGAACCGTTGAA 143253 Query 8989 CAACGGACTAAAAATGATCATCAAAATGGCGCGGATGACCAATGAGGGCCTCCAAAATCT 9048 | | ||||||| ||| | |||| | |||||||||||||||| | || ||||| Sbjct 143254 TCAAAGTCTAAAAAAGATGGTTAAAACTATGAGGATGACCAATGAGGGGTTACAGAATCT 143313 Query 9049 AGCCTCCACATTATCCTCCATGACCGCGAATTGCACTGCTGCAACGGATGTGGATTTAAC 9108 | |||||| | || || || || ||||| | | || ||||| || | || |||| Sbjct 143314 GGGCTCCACTCTGTCTTCTATCACTGCGAACATCTCCGCAGCAACTGAAGCTGACTTAAG 143373 Query 9109 TCCGCTGATTGCCTACTTGGTGTGCTCGTTGGA 9141 || | || | ||| |||| | ||||| || Sbjct 143374 CCCTATCATCCCGTACATGGTTGGTTCGTTTGA 143406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 43738394132979