Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031304.1 Length=10306 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 3e-15 >seq15 Length=2181291 Score = 93.3 bits (102), Expect = 3e-15 Identities = 127/173 (73%), Gaps = 6/173 (3%) Strand=Plus/Minus Query 5742 AGAAAGTCTGCTGGAATGGTCAATTGGGGGGACTGGAAGGGCTTCGACAAAAAGGATGGA 5801 ||| || |||||||| || || || |||||| | || | || |||||||||||||||| Sbjct 562417 AGAGAGCTTGCTGGAAAGGACAGTTCGGGGGATTAGAGGAACTACGACAAAAAGGATGGA 562358 Query 5802 GCGTACTTAATCTTCTTGTGATCTTAAGAGAATCTAAAATTCGAAACACGAAGGTCAGAG 5861 | || || || ||||| || || ||||||||| ||| |||| || || | || Sbjct 562357 GTGTCCTCAACCTTCTCGTTATAGAAAGAGAATCATGGATTAGAAATACTCTTGT-ATAG 562299 Query 5862 TCCT-TGCTCAAGGGGACAATCAAGTGATCTG--CACAAAATACA--AAATCC 5909 | | |||||||| ||||||||||| || || ||||| ||||| |||||| Sbjct 562298 ACTTAAGCTCAAGGAGACAATCAAGTCATTTGTACACAATATACAATAAATCC 562246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32862241241960