Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_032088.1 Length=10864 Score E Sequences producing significant alignments: (Bits) Value seq3825 78.8 6e-11 >seq3825 Length=1042611 Score = 78.8 bits (86), Expect = 6e-11 Identities = 115/160 (72%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 9987 GAACAACGTGGTCTATTCACGGAAAAGGTGAGTGGATGACGACAGAGGACATGCTCGAAG 10046 |||| ||||||| ||||| ||| |||| |||||||| ||||||||||||||| | Sbjct 957550 GAACGTCGTGGTCCATTCATCAAAACTGTGAATGGATGACAACAGAGGACATGCTCACTG 957609 Query 10047 TTTGGAACCGGGTGTGGATTAGAGACAACCCCCACATGGAAGAT-AAGACTGAAGTGACC 10105 | ||||| || || ||||| ||||||||| ||| || || |||| || || Sbjct 957610 TATGGAATCGCGTTTGGATCCAAGACAACCCATGGATGAAACATAAAGAATG-GGTCGAA 957668 Query 10106 AAATGGCAGGATGTTCCCTATTTGGGCAAAAGAGAAGATC 10145 || ||| ||||| | |||||| | ||| | | |||||| Sbjct 957669 AAGTGGGAGGATCTCCCCTATCTCCACAAGAAAAAAGATC 957708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34647745683344