Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_033699.1 Length=10173 Score E Sequences producing significant alignments: (Bits) Value seq100 95.1 8e-16 >seq100 Length=1779872 Score = 95.1 bits (104), Expect = 8e-16 Identities = 232/349 (66%), Gaps = 7/349 (2%) Strand=Plus/Plus Query 8731 GCGGTCGAGGATCCACGCTTTTGGGCCTTGGTGGAGCGAGAAAGAGCTCTCCATCTTGAG 8790 || ||| | || || || ||||||| | || | || |||||| ||||| || | Sbjct 212425 GCCGTCAATGACCCCCGGTTTTGGGAACTAGTAAACCGGGAAAGAAAACTCCACCTGGCC 212484 Query 8791 GGACGCTGTGAAACATGCATCTACAACATGATGGGAAAGAGAGAAAAGAAACCCGCTGAG 8850 || ||||| | ||| | ||||||| ||||| || | ||| ||| |||| | Sbjct 212485 GGGGACTGTGCGATGTGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGACCATA 212544 Query 8851 TTTGGGAAAGCAAAAGGCAGCAGGGCCATCTGGTACATGTGGCTGGGAGCTCGGTTCCTG 8910 |||| | | ||||| | || |||| |||| |||||||||||| ||| | ||| Sbjct 212545 GCTGGGGAGCCGAAAGGATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGATATCTG 212604 Query 8911 GAGTTTGAAGCTTTGGGATTTCTCAATGAAGACCATTGGCTCGGACGCGAGAACTCCAAA 8970 || | ||| || ||||| || ||||| |||||||||||| | | || || || | | Sbjct 212605 GAATATGAGGCCTTGGGCTTCCTCAACGAAGACCATTGGGTAGCCCGTGAAAATTTCCCG 212664 Query 8971 GCTGGAGTGGAAGGGACCGGCCTTCAATACCTCGGCTAT--GTTGTCAAAGATGTGGCAG 9028 | || |||| ||| |||| | | ||| | |||||| ||||| ||| | || Sbjct 212665 GGCGGCGTGGGAGGTCTCGGCGTAAACTACTTTGGCTATTACTTGTC--AGAAATAGCTT 212722 Query 9029 ATAAAGGAAACGGCATCATTTATGCCGATGACACAGCAGGCTGGGATAC 9077 |||||||| || | ||||||||||| ||| |||||||| || Sbjct 212723 CAAAAGGAAAGTTTTTCGT---TGCCGATGACATAGCTGGCTGGGACAC 212768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32436664018476