Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_033721.1 Length=10266 Score E Sequences producing significant alignments: (Bits) Value seq100 80.6 2e-11 >seq100 Length=1779872 Score = 80.6 bits (88), Expect = 2e-11 Identities = 162/235 (69%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 8824 GCCGTGGAGGACCCAAGGTTTTGGAGAATGGTCGATGAGGAGAGAGAGCTCCACCTC-CA 8882 ||||| | ||||| |||||||| | | || | ||| ||| | |||||||| | Sbjct 212425 GCCGTCAATGACCCCCGGTTTTGGGAACTAGTAAACCGGGAAAGAAAACTCCACCTGGCC 212484 Query 8883 GGGGAGGTGCGCAACCTGCGTGTACAACATGATGGGAAAGCGAGAGAAGAAGGCTGG-AG 8941 ||||| || || | ||||||||||||| ||||| || ||||||| | | | Sbjct 212485 GGGGAC-TGTGCGATGTGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGACCAT 212543 Query 8942 AGTTTGGCAAGGCAAAAGGAAGCAGGGCAATCTGGTATATGTGGCTAGGGAGTAGATTCC 9001 || | || | | | |||||| | || | || ||||||||||||| || ||| ||| | Sbjct 212544 AGCTGGGGA-GCCGAAAGGATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGATATC 212602 Query 9002 TGGAGTTTGAGGCTTTAGGTTTCTTGAACGAGGATCACTGGGCTTCGCGTGAGAA 9056 |||| | |||||| || || ||| | ||||| || || |||| | ||||| || Sbjct 212603 TGGAATATGAGGCCTTGGGCTTCCTCAACGAAGACCATTGGGTAGCCCGTGAAAA 212657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32734248092040