Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_033724.1 Length=10215 Score E Sequences producing significant alignments: (Bits) Value seq100 82.4 5e-12 >seq100 Length=1779872 Score = 82.4 bits (90), Expect = 5e-12 Identities = 110/148 (74%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 8850 GTGCGTGTATAACATGATGGGGAAAAGAGAGAAAAAAC-GTGGGGAGTTTGGCGTCGCGA 8908 ||||||||| |||| |||||||||| |||||| ||| | || | || | ||| Sbjct 212499 GTGCGTGTACAACACCATGGGGAAAAAAGAGAAGCAACCGACCATAGCTGGGGAGC-CGA 212557 Query 8909 AGGGAAGCCGAGCCATCTGGTACATGTGGCTGGGAAGCAGATTCCTTGAGTTTGAGGCGC 8968 | ||| ||| |||| |||| |||||||||||||| ||| || || | |||||| | Sbjct 212558 AAGGATCCCGGACCATTCGGTATATGTGGCTGGGAAGTCGATATCTGGAATATGAGGC-C 212616 Query 8969 TTGGG-TTCCTCAATGAAGATCACTGGG 8995 ||||| |||||||| ||||| || |||| Sbjct 212617 TTGGGCTTCCTCAACGAAGACCATTGGG 212644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32571056825892