Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_002526.1 Length=14900 Score E Sequences producing significant alignments: (Bits) Value seq1594 129 6e-26 >seq1594 Length=5600000 Score = 129 bits (142), Expect = 6e-26 Identities = 358/538 (67%), Gaps = 12/538 (2%) Strand=Plus/Plus Query 9994 GGTGAATGATTATGGTTTAGATTGGGAAAAATTGGTAATTGGACTAAAGGCTAAGGAAAG 10053 ||| |||||| | || | ||| ||| || | || || | | | |||||| ||||| Sbjct 3582657 GGTCAATGATCACGGGCTTGATCCGGAGCAACTAGTTATCGCCTTGAGGGCTAAAGAAAG 3582716 Query 10054 AGAGCTTAAAGAAGAAGGG-AGGtttttttCATTAATGTCTTATGAATTAAGGGA-TTAT 10111 || | || || || ||| || || || || | ||| | | ||||| |||| || | Sbjct 3582717 GGAAATCAAGGA-GATGGGCAGATTCTTCGCAATGATGGCATGGGAATTCCGGGAGTTCT 3582775 Query 10112 T--TTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGAAGGATTGA 10169 | ||||| || ||| || |||| || | ||| |||||| || ||| | || | | Sbjct 3582776 TCGTTGTC---ACCGAGCACCTAATCAAGACCCACTATGTGCCCTTGTTTCATGGCCTAA 3582832 Query 10170 CAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAGTGGTCAGG 10229 | ||||| || |||| || || || ||| | || ||||||| || ||| || || Sbjct 3582833 CCATGGCCGACGACCATAACACCGTGATCGAGAAGATGTTAGCTGCCTCCGATGCACAAA 3582892 Query 10230 GAACAAGGGAATATGAAT-ACATCACAATTGCCAATAATATTGATTATGAAAAATGGAAT 10288 | | || | || || | ||| ||| || | | || || |||||||| Sbjct 3582893 -ATCCAGAGGATCCCAACCAGGTCAACTATGCTAACCACCTAGACTACTCCAAATGGAAC 3582951 Query 10289 AACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATTTTTAGGC 10348 ||| ||||| || ||| |||||| || ||||||| |||||||| | |||||| || Sbjct 3582952 AACCATCAACGAGGAGAAGCCAATGACCCTGTGTTCAAGGTGATGGGCCAATTTTTGGGT 3583011 Query 10349 TTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTATTACAAC 10408 | || |||||||||||| ||||||| ||||| || | ||| ||||||| ||||| Sbjct 3583012 CTCCCAAATTTGTTTACTCGAACTCACGAGTTCTTTCGGAAGTCCCTGATCTACTACAAA 3583071 Query 10409 CAAAGACCAGACCTCATGATGGTGAGAGGACGGGAATGTC-TGAACAGATTGGGAGTGAA 10467 | |||||||||||||||| ||| || |||||| ||| | || | | | | Sbjct 3583072 GATAGACCAGACCTCATGAGGGT-TGAATCCGGGAAAGTCATAAATGCAACAGAACATAT 3583130 Query 10468 AGTGTGTTGGGAAGGACAAAAGGGAGGATTAGAAGGTTTGAGACAAAAGGGATGGAGC 10525 || |||||| | || ||| || || |||| || || | ||||| ||||||||| Sbjct 3583131 CGTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGC 3583188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47560260918015