Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_003635.1 Length=10600 Score E Sequences producing significant alignments: (Bits) Value seq570 105 5e-19 seq296 84.2 1e-12 >seq570 Length=1853759 Score = 105 bits (116), Expect = 5e-19 Identities = 197/288 (68%), Gaps = 1/288 (0%) Strand=Plus/Plus Query 8908 CATGGG-AAAAAGTGAAAAGAAACCTGGGGATTTTGGAGTTGCCAAGGGGAGCCGTACCA 8966 |||||| |||||| |||| ||||| |||| | ||||| || |||||| ||||| | Sbjct 257989 CATGGGCAAAAAGGAAAAAAAAACCGGGGGTTGCTGGAGAAGCTAAGGGGTCGCGTACGA 258048 Query 8967 TCTGGTACATGTGGCTCGGCAGTAGATTCCTGGAATTTGAAAGTTTTGGATTTCTGAATG 9026 | |||||||||||||| ||| | || ||||| ||||||||| | |||| || || || | Sbjct 258049 TTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCTTCCTCAACG 258108 Query 9027 AAGAACATTGGGCTTCACGGGAGTTGAGTGGGGGAGGAGTCGAAGGGATTCCCCTAAATT 9086 || || |||| | || ||| ||||||||| | || || | || | Sbjct 258109 CTGACCACTGGGTTAGTCGCGAGAACTTCCCGGGAGGAGTAGGGGGAGTTGGGGTCAACT 258168 Query 9087 ATTTAGGATACCATCTCAGAGAAATGGCCCAAAAACCAGGAGTGCTATATGCTGATGACA 9146 | || || | || | | ||| || || ||| | | | ||| || ||||||| Sbjct 258169 ACTTTGGGAATTATTTGAAAGACATCGCAAAAAGGGGAAAATTTTTATTCGCCGATGACA 258228 Query 9147 CAGCTGGATGGGACACCCGCATTACCATGGCAGATCTGGAGGATGAAG 9194 |||||||||||||| || |||| | | |||||||||||| |||| Sbjct 258229 TTGCTGGATGGGACACTCGTATTAGCTCTGAAGATCTGGAGGACGAAG 258276 >seq296 Length=5246318 Score = 84.2 bits (92), Expect = 1e-12 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 8868 TACACCTACAAGGGAAATGTGAGATGTGTGTGTACAACCTCATGGGAAAAAGTGAAAAGA 8927 |||| || ||||||||||| | |||||| | || || ||||| |||| ||||||| Sbjct 840591 TACATCTGCAAGGGAAATGCAATATGTGTCTCTATAATACTATGGGGAAAAAAGAAAAGA 840650 Query 8928 AACCTGGGGATTTTGGAGTTGCCAAGGGGAGCCGTACCATCTGGTACATGTGGCTCGGCA 8987 | || || | | ||| | || ||||| || || |||||||| ||||||||||| | Sbjct 840651 AGCCCGGAGTTGCTGGTGAGGCAAAGGGATCTCGGACTATCTGGTATATGTGGCTCGGGA 840710 Query 8988 GTAGATTCCTGGAATTTGAAAGTTTTGGATTTCTGAATGAAGAACATTGGG 9038 | |||||| |||| | ||| | | || ||||| | ||| || |||| Sbjct 840711 GCAGATTCTTGGAGTACGAAGCGCTGGCGTTCCTGAACGCAGACCACTGGG 840761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 33803873959760