Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_003675.1 Length=10140 Score E Sequences producing significant alignments: (Bits) Value seq570 91.5 1e-14 >seq570 Length=1853759 Score = 91.5 bits (100), Expect = 1e-14 Identities = 201/294 (68%), Gaps = 17/294 (6%) Strand=Plus/Plus Query 8818 ATGGGTAAAAGAGAAAAGAAACCAGGTGAGTT--TGGATGTGCCAAGGGTAGCCGGACCA 8875 ||||| |||| ||||| ||| | || | ||| |||| || ||||| || || | Sbjct 257990 ATGGGCAAAAAGGAAAAAAAAACCGGGG-GTTGCTGGAGAAGCTAAGGGGTCGCGTACGA 258048 Query 8876 TATGGTACATGTGGTTAGGTAGCAGGTTCCTAGAATTTGAATCTTTCGGCTTCTTGAATG 8935 | |||||||||||| |||| |||||||||||||||||||| || | |||||| | || | Sbjct 258049 TTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCTTCCTCAACG 258108 Query 8936 AGGAACATTGGG--CATCAAGAGAGTTGTCTGGAGGAGGGGTAGAGAGCATACCACTGTT 8993 || || |||| || |||| | | | ||||| |||| | | | | Sbjct 258109 CTGACCACTGGGTTAGTCGCGAGAACTTCCCG--GGAGGAGTAGGGGGAGTTGGGGTCAA 258166 Query 8994 CTACCTTGGATATCATCTAAGAGAGATGGCTAAGAAACCTGGAAAACTCTAT--GCTGAT 9051 |||| |||| || || | | ||| || || | ||| | ||| | ||| || ||| Sbjct 258167 CTACTTTGGGAATTATTTGAAAGACATCGC--AAAAAGGGGAAAATTTTTATTCGCCGAT 258224 Query 9052 GACACTGCAGGATGGGACACTCGTATAA---CTGAAGCAGATCTGGATGATGAA 9102 |||| ||| ||||||||||||||||| | |||| ||||||||| || ||| Sbjct 258225 GACATTGCTGGATGGGACACTCGTATTAGCTCTGA---AGATCTGGAGGACGAA 258275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32331914283360