Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_008514.1 Length=11545 Score E Sequences producing significant alignments: (Bits) Value seq1594 109 4e-20 seq1107 102 6e-18 seq1774 96.9 3e-16 >seq1594 Length=5600000 Score = 109 bits (120), Expect = 4e-20 Identities = 394/607 (65%), Gaps = 26/607 (4%) Strand=Plus/Plus Query 6701 CTGGTTATCGGATTGAAAGGGAAAGAAAGAGAATTAAAGAAAGCAGGACGTTTCTTCTCC 6760 || ||||||| |||| | |||||||| ||| | ||| | || | |||||| | Sbjct 3582688 CTAGTTATCGCCTTGAGGGCTAAAGAAAGGGAAATCAAGGAGATGGGCAGATTCTTCGCA 3582747 Query 6761 CTTATGTCATGGAAATTACGAGAGTATTTCGTCATGACAGAATATCTGATCAAACACCAC 6820 | ||| ||||| |||| || |||| ||||| | || || | || ||||| |||| Sbjct 3582748 ATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCACCTAATCAAGACCCAC 3582807 Query 6821 TTTGTCCCACTATTTCATGGATTGACTATGGCGGATGAC-ATGACTCAAGTTATGAAGAA 6879 | ||| || | |||||||| | || ||||| || ||| || || | || || |||| Sbjct 3582808 TATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAACACC-GTGATCGAGAA 3582866 Query 6880 AATGTTAGACAGAAGTCAAGGG-CAAGG---AGAGAATGACTACCAGAGAGTCAGTATTG 6935 ||||||| | | | | | ||| |||| || | ||||| |||| || Sbjct 3582867 GATGTTAG-CTGCCTCCGATGCACAAAATCCAGAGGATCCCAACCAG---GTCAACTATG 3582922 Query 6936 CAAACCATATTGACTATGAAAAGTGGAACAATCACCAAAGGAGAGAATCAAATGGACCAA 6995 | ||||| | ||||| || |||||||| || ||| | ||||| | |||| || Sbjct 3582923 CTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTG 3582982 Query 6996 CGTTTCGCGTGATGGGACAATTCTTGGGCTATCCATCTTTGAT----CGAAAAGACGCAT 7051 ||| |||||||| ||||| ||||| ||| |||| | |||| | || Sbjct 3582983 TGTTCAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTACTCGAA----CTCAC 3583038 Query 7052 GAGTTCTTCGAGAAAAGCCCGATATACTACAATGGCAGGCCGGATTTAATGCAAGT--AA 7109 |||||||| ||| || ||| |||||||| | || || || | ||| || || Sbjct 3583039 GAGTTCTTTCGGAAGTCCCTGATCTACTACAAAGATAGACCAGACCTCATGAGGGTTGAA 3583098 Query 7110 --CTGGAAACCAGGTGATCAACTCCACTGATAAACTTGTTTGCTGGCAGGGACAAAAGGG 7167 | ||||| || || || | || || | | ||||| ||| |||| ||| || Sbjct 3583099 TCCGGGAAA----GTCATAAATGCAACAGAACATATCGTTTGTTGGAAGGGCCAAGCAGG 3583154 Query 7168 AGGGCTAGAGGGACTAAGACAGAAAGGATGGAGCATTTTGAATCTGTTAATCATCAGGAG 7227 ||||||||||| || | || |||||||||||| || |||| | |||| | | Sbjct 3583155 CGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTGGGCATCGAGCG 3583214 Query 7228 AGAGTCTAAAATCCGGAACACTCGAGTCCAGACTCTGGCGCAAGGAGACAATCAAGTCAT 7287 || | || |||| ||| || | || || |||||| ||||||||||| || | || Sbjct 3583215 TCAGGCCAAGATCCAGAATACCCATATCAAGTGTCTGGCCCAAGGAGACAACCAGATAAT 3583274 Query 7288 TTGCACC 7294 |||||| Sbjct 3583275 ATGCACC 3583281 >seq1107 Length=3620151 Score = 102 bits (112), Expect = 6e-18 Identities = 286/431 (66%), Gaps = 20/431 (5%) Strand=Plus/Minus Query 6780 GAGAGTATTTCGTCATGACAGAATATCTGATCAAACACCACTTTGTCCCACTATTTCATG 6839 |||||| ||| || | |||||| || |||||||| ||||| ||| ||| | || || | Sbjct 2214968 GAGAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCACG 2214909 Query 6840 GATTGACTATGGCGGATGACATGACTCAAGTTATGAAGAAAATGTTAGA-----CAGAAG 6894 | | || ||||| || ||| | | ||| || |||| ||| | | |||| | Sbjct 2214908 GGCTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCGCAGCTTCAGATG 2214849 Query 6895 TCAAGGGCAAGGAGAGAAT-GACTACCAGAGAGTCAGTATTGCAAACCATATTGACTATG 6953 | || | ||| ||| || |||| ||| | | || || || |||| || Sbjct 2214848 CCCAGAACCCGGA-AGACCCGA--ACCA---AGTAAATTACGCGAATCACCTTGATTACT 2214795 Query 6954 AAAAGTGGAACAATCACCAAAGGAGAGAATCAAATGGACCAACGTTTCGCGTGATGGGAC 7013 ||||||||| || ||||| | |||| | || | || |||| | || ||||| | Sbjct 2214794 CAAAGTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTC 2214735 Query 7014 AATTCTTGGG-CTATCCATCTTTGATCGAAAAGACGCATGAGTTCTTCGAGAAAAGCCCG 7072 ||||| |||| || | | | | | || ||| |||||||||||| ||||| || Sbjct 2214734 AATTCCTGGGGCTCCCGAACCT-GTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTT 2214676 Query 7073 ATATACTACAATGGCAGGCCGGATTTAATGCAAGT---AACTGGAAACCAGGTGATCAAC 7129 | || ||||| | | ||||||| | ||| ||| | |||||| |||| ||||| Sbjct 2214675 GTCTATTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAA---AGGTCATCAAT 2214619 Query 7130 TCCACTGATAAACTTGTTTGCTGGCAGGGACAAAAGGGAGGGCTAGAGGGACTAAGACAG 7189 |||| || || | ||||||||| |||| ||| || || || || || ||| ||||| Sbjct 2214618 GCCACCGAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAG 2214559 Query 7190 AAAGGATGGAG 7200 || |||||||| Sbjct 2214558 AAGGGATGGAG 2214548 >seq1774 Length=2904822 Score = 96.9 bits (106), Expect = 3e-16 Identities = 285/431 (66%), Gaps = 20/431 (5%) Strand=Plus/Minus Query 6780 GAGAGTATTTCGTCATGACAGAATATCTGATCAAACACCACTTTGTCCCACTATTTCATG 6839 |||||| ||| || | |||||| || |||||||| ||||| ||| ||| | || || | Sbjct 1686460 GAGAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTCCACG 1686401 Query 6840 GATTGACTATGGCGGATGACATGACTCAAGTTATGAAGAAAATGTTAGA-----CAGAAG 6894 | | || ||||| || ||| | | ||| || |||| ||| | | |||| | Sbjct 1686400 GGCTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCGCAGCTTCAGATG 1686341 Query 6895 TCAAGGGCAAGGAGAGAAT-GACTACCAGAGAGTCAGTATTGCAAACCATATTGACTATG 6953 | || | ||| ||| || |||| ||| | | || || || | || || Sbjct 1686340 CCCAGAACCCGGA-AGACCCGA--ACCA---AGTAAATTACGCGAATCACCTGGATTACT 1686287 Query 6954 AAAAGTGGAACAATCACCAAAGGAGAGAATCAAATGGACCAACGTTTCGCGTGATGGGAC 7013 ||||||||| || ||||| | |||| | || | || |||| | || ||||| | Sbjct 1686286 CAAAGTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGGTC 1686227 Query 7014 AATTCTTGGG-CTATCCATCTTTGATCGAAAAGACGCATGAGTTCTTCGAGAAAAGCCCG 7072 ||||| |||| || | | | | | || ||| |||||||||||| ||||| || Sbjct 1686226 AATTCCTGGGGCTCCCGAACCT-GTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCTT 1686168 Query 7073 ATATACTACAATGGCAGGCCGGATTTAATGCAAGT---AACTGGAAACCAGGTGATCAAC 7129 | || ||||| | | ||||||| | ||| ||| | |||||| |||| ||||| Sbjct 1686167 GTCTATTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAA---AGGTCATCAAT 1686111 Query 7130 TCCACTGATAAACTTGTTTGCTGGCAGGGACAAAAGGGAGGGCTAGAGGGACTAAGACAG 7189 |||| || || | ||||||||| |||| ||| || || || || || ||| ||||| Sbjct 1686110 GCCACCGAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAG 1686051 Query 7190 AAAGGATGGAG 7200 || |||||||| Sbjct 1686050 AAGGGATGGAG 1686040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36827791121060