Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_020803.1 Length=11487 Score E Sequences producing significant alignments: (Bits) Value seq1594 95.1 9e-16 >seq1594 Length=5600000 Score = 95.1 bits (104), Expect = 9e-16 Identities = 367/560 (66%), Gaps = 34/560 (6%) Strand=Plus/Plus Query 6688 TTCTTCTCTCTGATGTCATGGGAATTGAGAGAATATTTTGTAATAACAGAATACTTAATC 6747 |||||| | ||||| |||||||||| | || | || || | || || || ||||| Sbjct 3582739 TTCTTCGCAATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCACCTAATC 3582798 Query 6748 AAGACACACTATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGAT-ATGACGGAAGT 6806 ||||| |||||||||||||| || | || |||||||||| || || || || || Sbjct 3582799 AAGACCCACTATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAACACC-GT 3582857 Query 6807 TGTAAAGAAAATGCTAGAAAGGAGTCAAGGGCAGGGAGA--AGATGACTACGAGCACATC 6864 | |||| ||| ||| | || ||| | ||| || | | || || Sbjct 3582858 GATCGAGAAGATGTTAGCT--GCCTCCGATGCACAAAATCCAGAGGATCCCAACCAGGTC 3582915 Query 6865 AGCATTGCCAACCACATTGACTATGAGAAGTGGAATAATCATCAGAGAAAGGAATCAAAT 6924 | | ||| |||||| | ||||| || ||||| || ||||| || ||| | ||| Sbjct 3582916 AACTATGCTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGAAGCCAAT 3582975 Query 6925 GGGCCTGTGTTCAGAGTCATGGGACAATTCCTAGGATATCCCA-----GTTTGATCGAAA 6979 | |||||||||| || ||||| ||||| | || | ||||| |||| ||||| Sbjct 3582976 GACCCTGTGTTCAAGGTGATGGGCCAATTTTTGGG-TCTCCCAAATTTGTTTACTCGAA- 3583033 Query 6980 AAACTCATGACTTTTTTC--AAGACAGCTTGATTTATTACAATGGGAGACCAGACCTGAT 7037 |||| || || |||| ||| | | |||| || ||||| | ||||||||||| || Sbjct 3583034 ---CTCACGAGTTCTTTCGGAAGTC--CCTGATCTACTACAAAGATAGACCAGACCTCAT 3583088 Query 7038 G-GAAGTGA---GGGGGAATGAATTATTG-AACAAAACAGACAAGCTTGTCTGTTGGGAT 7092 | | ||| ||| || || | || |||| |||| | | || |||||| | Sbjct 3583089 GAGGGTTGAATCCGGGAAAGTCATAAATGCAACAGAACATA-----TCGTTTGTTGGAAG 3583143 Query 7093 GGTCAGGCTGGAGGACTGGAAGGACTGAGACAAAAGGGATGGAGCATATTGAATCTACTT 7152 || || || || || || || || ||| | ||||| ||||||||| | |||| |||| | Sbjct 3583144 GGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAA-CTACCT 3583202 Query 7153 GTG-ATTCAGAGAGAGTCCAAAATCAGAAACACCAAAGTGCAAACAT-TGGCTCAGGGAG 7210 | | || || | || |||| ||| || ||| | | ||| | |||| || |||| Sbjct 3583203 GGGCATCGAGCGTCAGGCCAAGATCCAGAATACCCATAT-CAAGTGTCTGGCCCAAGGAG 3583261 Query 7211 ACAATCAAGTTGTTTGCACC 7230 |||| || | | |||||| Sbjct 3583262 ACAACCAGATAATATGCACC 3583281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36642196205340