Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq1594 172 4e-39 seq1107 131 1e-26 seq1774 122 6e-24 seq1480 107 1e-19 >seq1594 Length=5600000 Score = 172 bits (190), Expect = 4e-39 Identities = 392/581 (67%), Gaps = 18/581 (3%) Strand=Plus/Plus Query 6320 AAAGAAAGAGAACTGAAGATTGCAGGTAGATTTTTCTCATTGATGTCTTGGAAGCTTAGG 6379 |||||||| ||| | ||| || ||||| ||| || ||||| | ||| | | || Sbjct 3582709 AAAGAAAGGGAAATCAAGGAGATGGGCAGATTCTTCGCAATGATGGCATGGGAATTCCGG 3582768 Query 6380 GAATACTTTGTTGTCACAGAGTATTTGATCAAGACTCACTTTGTGCCATTGTTCCATGGG 6439 || | ||| |||||||| ||| | | |||||||| |||| |||||| ||||| ||||| Sbjct 3582769 GAGTTCTTCGTTGTCACCGAGCACCTAATCAAGACCCACTATGTGCCCTTGTTTCATGGC 3582828 Query 6440 CTGACCATGGCTGATGAT-ATGACAGCAGTGATCAAAAAGATGCTGGAAAGCTCGTCTGG 6498 || |||||||| || || || ||| | |||||| | |||||| | | ||| || Sbjct 3582829 CTAACCATGGCCGACGACCATAACACC-GTGATCGAGAAGATGTTAGCTGCCTCCGATGC 3582887 Query 6499 TCAAGGGCTAA------CAAACTACGACAGCGTTTGTATTGCAAATCATATTGACTATGA 6552 ||| | | | ||| | | || | ||| || || || | ||||| Sbjct 3582888 ACAAAATCCAGAGGATCCCAACCAGGTCAAC-----TAT-GCTAACCACCTAGACTACTC 3582941 Query 6553 AAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTGTTTAAAGTCATGGGACA 6612 |||||||| || ||||||||| | |||||| |||||||| || || ||||| || Sbjct 3582942 CAAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGTGTTCAAGGTGATGGGCCA 3583001 Query 6613 ATTCTTGGGTTATCCAAATTTGATATAC-CGGACACATGAGTTTTTTGAGAAAAGTTTAA 6671 ||| |||||| ||||||||| | ||| || || || ||||| ||| ||| | | Sbjct 3583002 ATTTTTGGGTCTCCCAAATTTGTT-TACTCGAACTCACGAGTTCTTTCGGAAGTCCCTGA 3583060 Query 6672 TTTACTATAATGAAAGACCGGATCTCATGAAAGTCAGAAATGGGATCTTAGAAAATAGCA 6731 | ||||| || || ||||| || ||||||| || | |||| | |||| | Sbjct 3583061 TCTACTACAAAGATAGACCAGACCTCATGAGGGTTGAATCCGGGAAAGTCATAAATGCAA 3583120 Query 6732 CACATCAGAGGGTTTGCTGGAATGGACAGGCAGGTGGTTTAGAAGGTTTGAGACAGAAAG 6791 || | || | ||||| ||||| || || ||||| || |||| || || | || |||| Sbjct 3583121 CAGAACATATCGTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAAAAG 3583180 Query 6792 GATGGAGTATTCTTAATTTGCTGGTCATACAGAGAGAAGCGAAAATCCGGAATACCGCAG 6851 ||||||| || | || | |||| ||| || | | || || |||| ||||||| || Sbjct 3583181 GATGGAGCGTTGTGAACTACCTGGGCATCGAGCGTCAGGCCAAGATCCAGAATACC-CAT 3583239 Query 6852 TTAAAGTG-CTAGCACAAGGCGACAATCAAGTCATATGTAC 6891 | ||||| || || ||||| ||||| || | ||||| || Sbjct 3583240 ATCAAGTGTCTGGCCCAAGGAGACAACCAGATAATATGCAC 3583280 >seq1107 Length=3620151 Score = 131 bits (144), Expect = 1e-26 Identities = 542/837 (65%), Gaps = 20/837 (2%) Strand=Plus/Minus Query 6020 ACATGGCCAACAGCTGCAGTGATCCAAGATTTTGGAGATCACTGGCATGAGCTCCCATTA 6079 || ||||| | || ||| |||||| | | ||||| ||||| | |||||| | Sbjct 2215326 ACCTGGCCGTCCGCGGCAAGGATCCAGGCGGTGGGAGACATTTGGCACAAACTCCCACTG 2215267 Query 6080 ATTCAATGCTTCGACATACCTGATCTGATTGATCCATCCATTATCTACTCAGACAAGAGC 6139 ||||| |||||||| | || ||| ||||| || | |||||||| |||| ||| Sbjct 2215266 ATTCAGTGCTTCGATGTTCCGGATTATATTGACCCGACTATTATCTATGCAGATAAGCAT 2215207 Query 6140 CATTCCATGAATCGATCAGAGGTGTTAAATCATGTA-AGAACCAAGCCTCATACACCGAT 6198 ||||||||| || |||||||||| ||||| || |||| | | | | ||||| Sbjct 2215206 CATTCCATGGGCAGAACAGAGGTGTTGAATCACATAGAGAATCGACCGGGCCAG-CCGAT 2215148 Query 6199 TCCAAGCAAGAAAGTTT-TAGAGAGTATGATCGACAAACCAGCG-ACAAATTGGCTTGAG 6256 ||| | || | | | || | || | ||| ||| ||||| ||| || Sbjct 2215147 TCCCT-CTCGATCGGTACTGGAAACCTACATAG-CAACTGAGCCCACAAACTGGAGCGAC 2215090 Query 6257 TTTCTT-GAAGAGATCGACAAAAATGGATT--ATCTGATGAGGATTTGGTGATCGGATTA 6313 ||||| |||||| | || | | ||| | ||| | ||| | |||||||||| || Sbjct 2215089 TTTCTACGAAGAG-TGAACGACTACGGACTTGATCCG--GAGCAGTTGGTGATCGCCCTA 2215033 Query 6314 AAAGGAAAAGAAAGAGAACTGAAGATTGCAGGTAGATTTTTCTCATTGATGTCTTGGAAG 6373 || || ||| |||| | ||| || |||||||| | ||||| | ||| || Sbjct 2215032 CGAGCCAAGGAACGAGAGATCAAGGAGATGGGGAGATTTTTTGCCATGATGGCGTGGGAG 2214973 Query 6374 CTTAGGGAATACTTTGTTGTCACAGAGTATTTGATCAAGACTCACTTTGTGCCATTGTTC 6433 ||||| || | ||||| |||||||| |||||||||| || |||| ||| ||||||||| Sbjct 2214972 CTTAGAGAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTC 2214913 Query 6434 CATGGGCTGACCATGGCTGATGATATGACAGCAGTGATCAAAAAGATGCTGGAAAGCTCG 6493 || ||||| |||||||| || || | ||||||| | |||||||| | |||| Sbjct 2214912 CACGGGCTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCG-CAGCT-- 2214856 Query 6494 TCTG--GTCAAGGGCTAACAAACTACGACAGCGTTTGTATT--GCAAATCATATTGACTA 6549 || | | | || | || ||| | | | ||| || ||||| |||| || Sbjct 2214855 TCAGATGCCCAGAACCCGGAAGACCCGA-ACCAAGTAAATTACGCGAATCACCTTGATTA 2214797 Query 6550 TGAAAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTGTTTAAAGTCATGGG 6609 ||| |||||||| || || ||| | | | || | || ||||||| |||||||| Sbjct 2214796 CTCAAAGTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGG 2214737 Query 6610 ACAATTCTTGGGTTATCCAAATTTGATATACCGGACACATGAGTTTTTTGAGAAAAGTTT 6669 |||||| |||| || || || | ||||| |||||||| || ||||| | Sbjct 2214736 TCAATTCCTGGGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCT 2214677 Query 6670 AATTTACTATAATGAAAGACCGGATCTCATGAAAGTCAGAAATGGGATCTTAGAAAATAG 6729 | || || || || | ||||| || |||| ||| | ||| | | ||| Sbjct 2214676 TGTCTATTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAAAGGTCATCAATGC 2214617 Query 6730 CACACATCAGAGGGTTTGCTGGAATGGACAGGCAGGTGGTTTAGAAGGTTTGAGACAGAA 6789 ||| | | | ||||||||| | || || || || || | ||||| | ||||||| Sbjct 2214616 CACCGAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAA 2214557 Query 6790 AGGATGGAGTATTCTTAATTTGCTGGTCATACAGAGAGAAGCGAAAATCCGGAATAC 6846 ||||||||| | | || | || | || | || |||| || |||||||| || Sbjct 2214556 GGGATGGAGTGTGGTCAACTACCTTGGGATCGAAAGGCAAGCAAAGATCCGGAACAC 2214500 >seq1774 Length=2904822 Score = 122 bits (134), Expect = 6e-24 Identities = 540/837 (65%), Gaps = 20/837 (2%) Strand=Plus/Minus Query 6020 ACATGGCCAACAGCTGCAGTGATCCAAGATTTTGGAGATCACTGGCATGAGCTCCCATTA 6079 || ||||| | || ||| |||||| | | ||||| ||||| | |||||| | Sbjct 1686818 ACCTGGCCGTCCGCGGCAAGGATCCAGGCGGTGGGAGACATTTGGCACAAACTCCCACTG 1686759 Query 6080 ATTCAATGCTTCGACATACCTGATCTGATTGATCCATCCATTATCTACTCAGACAAGAGC 6139 ||||| |||||||| | || ||| ||||| || | |||||||| |||| ||| Sbjct 1686758 ATTCAGTGCTTCGATGTTCCGGATTATATTGACCCGACTATTATCTATGCAGATAAGCAT 1686699 Query 6140 CATTCCATGAATCGATCAGAGGTGTTAAATCATGTA-AGAACCAAGCCTCATACACCGAT 6198 ||||||||| || |||||||||| ||||| || |||| | | | | ||||| Sbjct 1686698 CATTCCATGGGCAGAACAGAGGTGTTGAATCACATAGAGAATCGACCGGGCCAG-CCGAT 1686640 Query 6199 TCCAAGCAAGAAAGTTT-TAGAGAGTATGATCGACAAACCAGCG-ACAAATTGGCTTGAG 6256 ||| | || | | | || | || | ||| ||| ||||| ||| || Sbjct 1686639 TCCCT-CTCGATCGGTACTGGAAACCTACATAG-CAACTGAGCCCACAAACTGGAGCGAC 1686582 Query 6257 TTTCTT-GAAGAGATCGACAAAAATGGATT--ATCTGATGAGGATTTGGTGATCGGATTA 6313 ||||| |||||| | || | | || | ||| | ||| | |||||||||| || Sbjct 1686581 TTTCTACGAAGAG-TGAACGACTACGGCCTTGATCCG--GAGCAGTTGGTGATCGCCCTA 1686525 Query 6314 AAAGGAAAAGAAAGAGAACTGAAGATTGCAGGTAGATTTTTCTCATTGATGTCTTGGAAG 6373 || || ||| |||| | ||| || |||||||| | ||||| | ||| || Sbjct 1686524 CGAGCCAAGGAACGAGAGATCAAGGAGATGGGGAGATTTTTTGCCATGATGGCGTGGGAG 1686465 Query 6374 CTTAGGGAATACTTTGTTGTCACAGAGTATTTGATCAAGACTCACTTTGTGCCATTGTTC 6433 ||||| || | ||||| |||||||| |||||||||| || |||| ||| ||||||||| Sbjct 1686464 CTTAGAGAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCACTATGTTCCATTGTTC 1686405 Query 6434 CATGGGCTGACCATGGCTGATGATATGACAGCAGTGATCAAAAAGATGCTGGAAAGCTCG 6493 || ||||| |||||||| || || | ||||||| | |||||||| | |||| Sbjct 1686404 CACGGGCTCACCATGGCAGACGACCACAATACAGTGATAGAGAAGATGCTCG-CAGCT-- 1686348 Query 6494 TCTG--GTCAAGGGCTAACAAACTACGACAGCGTTTGTATT--GCAAATCATATTGACTA 6549 || | | | || | || ||| | | | ||| || ||||| | || || Sbjct 1686347 TCAGATGCCCAGAACCCGGAAGACCCGA-ACCAAGTAAATTACGCGAATCACCTGGATTA 1686289 Query 6550 TGAAAAATGGAATAATCATCAACGAAAATTGTCCAATGGACCTGTGTTTAAAGTCATGGG 6609 ||| |||||||| || || ||| | | | || | || ||||||| |||||||| Sbjct 1686288 CTCAAAGTGGAATAACCACCAGCGAGGAGAGGCGAACGACCCGGTGTTTAGGGTCATGGG 1686229 Query 6610 ACAATTCTTGGGTTATCCAAATTTGATATACCGGACACATGAGTTTTTTGAGAAAAGTTT 6669 |||||| |||| || || || | ||||| |||||||| || ||||| | Sbjct 1686228 TCAATTCCTGGGGCTCCCGAACCTGTTCACTCGGACCCATGAGTTCTTCAAGAAATCCCT 1686169 Query 6670 AATTTACTATAATGAAAGACCGGATCTCATGAAAGTCAGAAATGGGATCTTAGAAAATAG 6729 | || || || || | ||||| || |||| ||| | ||| | | ||| Sbjct 1686168 TGTCTATTACAAAGACCGGCCGGACCTGATGAGAGTGGAATCTGGAAAGGTCATCAATGC 1686109 Query 6730 CACACATCAGAGGGTTTGCTGGAATGGACAGGCAGGTGGTTTAGAAGGTTTGAGACAGAA 6789 ||| | | | ||||||||| | || || || || || | ||||| | ||||||| Sbjct 1686108 CACCGAAAACATCGTTTGCTGGGAGGGCCAAGCCGGCGGACTGGAAGGGCTACGACAGAA 1686049 Query 6790 AGGATGGAGTATTCTTAATTTGCTGGTCATACAGAGAGAAGCGAAAATCCGGAATAC 6846 ||||||||| | | || | || | || | || |||| || |||||||| || Sbjct 1686048 GGGATGGAGTGTGGTCAACTACCTTGGGATCGAAAGGCAAGCAAAGATCCGGAACAC 1685992 >seq1480 Length=8353993 Score = 107 bits (118), Expect = 1e-19 Identities = 207/303 (68%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 6529 TATTGCAAATCATATTGACTATGAAAAATGGAATAATCATCAACGAAAATTGTCCAATGG 6588 ||| || ||||| || || |||||||||||||| || |||| ||| | | ||| | Sbjct 8252951 TATCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTC 8252892 Query 6589 ACCTGTGTTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATTTGATATACCGGACACA 6648 || || || | ||| || || ||||| || || || ||| | | ||| || || Sbjct 8252891 CCCCGTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCA 8252832 Query 6649 TGAGTTTTTTGAGAAAAGTTTAATTTACTATAATGAAAGACCGGATCTCATGAAAGTCAG 6708 ||| || ||||| ||| ||||| || ||| || | || ||||| || || ||| Sbjct 8252831 TGAATTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGGTCGA 8252772 Query 6709 AAATGGGATCTTAGAAAATA-GCACACATCA--GAGGGTTTGCTGGAATGGACAGGCAGG 6765 | ||||| | | | ||| | || | | || | | || |||||||||||||| || Sbjct 8252771 AGATGGGGTGGTCGCGAATGTGGACCCGGAAAGGATGATGTGTTGGAATGGACAGGCCGG 8252712 Query 6766 TGGTTTAGAAGGTTTGAGACAGAAAGGATGGAGTATTCTTAATTTGCTGGTCATACAGAG 6825 || | ||||| |||||||| ||||| |||||| |||| ||||| |||| || |||| Sbjct 8252711 AGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAATCGAGAG 8252652 Query 6826 AGA 6828 || Sbjct 8252651 GGA 8252649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35467828376560