Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_021069.1 Length=10865 Score E Sequences producing significant alignments: (Bits) Value seq296 159 2e-35 seq570 123 2e-24 seq65 87.8 1e-13 >seq296 Length=5246318 Score = 159 bits (176), Expect = 2e-35 Identities = 287/414 (69%), Gaps = 4/414 (1%) Strand=Plus/Plus Query 8727 ATGGAGCTCCGAAATGCCGTGGAATGGAGTCAATGAAGCGTTGAACGACCCTGCGTTCTG 8786 ||||||| ||| || || |||| | || | || | | || | |||| | ||||| Sbjct 840505 ATGGAGCCGCGATATCCCCTGGAGAGATGTGCAGGAGGTGGTGCAAGACCAGTCCTTCTG 840564 Query 8787 GAGTTTGGTTGATCGAGAGCGAGCGTTGCACCTG-AAGGGAGATTGTGAGCTCTGTGTCT 8845 || | | |||| |||||||| || | || ||| |||||| || | | | ||| ||| Sbjct 840565 GAATCTTGTTGGCCGAGAGCGTGCTCTACATCTGCAAGGGAAAT-GCAATATGTGTCTCT 840623 Query 8846 ACAACACCATGGGCAAGAAGGAAAAGAAACC-GTCTTCGTTCGGTGAAGCTCGCGGATCA 8904 | || || ||||| || || |||||||| || | | | | ||||| || ||||| Sbjct 840624 ATAATACTATGGGGAAAAAAGAAAAGAAGCCCGGAGTTGCT-GGTGAGGCAAAGGGATCT 840682 Query 8905 CGCATCATCTGGTACATGTGGTTGGGAAGTAGGTTCCTCGAGTATGAAGCGCTCGGGTTC 8964 || | |||||||| |||||| | || || || ||| | ||||| |||||||| | |||| Sbjct 840683 CGGACTATCTGGTATATGTGGCTCGGGAGCAGATTCTTGGAGTACGAAGCGCTGGCGTTC 840742 Query 8965 TTAAACGAAGACCATTGGGTCGCGCGGGAGAATTTTCCGTGCGGTGTCGGAGGTGTGGGA 9024 | |||| |||||| |||||| || |||||||| || | || || || ||||| || Sbjct 840743 CTGAACGCAGACCACTGGGTCAGCCGTGAGAATTTCCCCGGAGGAGTTGGCGGTGTTGGC 840802 Query 9025 GTGAATTACTTTGGGTATTACCTAAAGGAGATCGCCCAGAAAGGACAATGGCTGATAGCC 9084 || || || ||||| |||| || |||||||| || |||||| | | || | || Sbjct 840803 GTCAACTATTTTGGCAATTATCTCAAGGAGATTTCCTGCAAAGGAAAGTACCTCTTTGCG 840862 Query 9085 GACGACGTGGCAGGCTGGGACACTAAGATCACGGAAGCTGACCTTGAAGACGAG 9138 || ||| | || || |||||||| ||| | | | || |||||||||||| Sbjct 840863 GATGACATTGCTGGTTGGGACACCAAGGTGAGCTCTGAGGATCTTGAAGACGAG 840916 Score = 95.1 bits (104), Expect = 8e-16 Identities = 167/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 7639 GGAGATTATGTTTCCCGCGGTGGACTGAAGATGGATGAGCTGCTACGGAAGTTCCAGTGG 7698 || || ||||| || ||||| || ||||| |||||||| | | | |||| | ||||| Sbjct 831914 GGTGACTATGTGTCTCGCGGAGGCCTGAAATTGGATGAGATAATCCACAAGTACAAGTGG 831973 Query 7699 GAACCAAAAGGTGTTGCTGTCGACCTTGGATGTGGAAGAGGAGGTTGGAGCCAACGTTTG 7758 | || | ||| || || ||||| ||||| ||| | || |||||||||||||| | Sbjct 831974 GCCCCTATAGGCCATGTGGTGGACCTCGGATGCGGACGCGGCGGTTGGAGCCAACGCGCG 832033 Query 7759 GTGATGGATTCACGGGTTAGCGCCGTCCAGGGATTCACTCTTGGAGGTAACAACCGCGAA 7818 || ||||| | || | | || ||||||| ||| | || || | ||| Sbjct 832034 GTCATGGAAGAAACCGTGACGTCAGTGCAGGGATACACCATCGGTGGGGCGGAAAAGGAA 832093 Query 7819 AACCCCCAACCRTTYCGAACGAAGGGACACAACCTGGCAACGTTGAAAGCTGGAGTTGAT 7878 |||||||| || | ||| || |||| || || || ||||||||||||||||| Sbjct 832094 AACCCCCAGAGGTTCCTAACTCGCGGCTACAATCTAGCCACCTTGAAAGCTGGAGTTGAC 832153 Query 7879 GTTTA 7883 ||||| Sbjct 832154 GTTTA 832158 >seq570 Length=1853759 Score = 123 bits (136), Expect = 2e-24 Identities = 387/588 (66%), Gaps = 21/588 (4%) Strand=Plus/Plus Query 8848 AACACCATGGGCAAGAAGGAAAAGAAACC--GTCTTCGTTCGGTGAAGCTCGCGGATCAC 8905 || ||||||||||| |||||||| ||| | | | | | || |||||| || || | Sbjct 257984 AATACCATGGGCAAAAAGGAAAAAAAAACCGGGGGTTGCT-GGAGAAGCTAAGGGGTCGC 258042 Query 8906 GCATCATCTGGTACATGTGGTTGGGAAGTAGGTTCCTCGAGTATGAAGCGCTCGGGTTCT 8965 | | || |||||||||||| | || | |||||||| || | |||||| || || ||| Sbjct 258043 GTACGATTTGGTACATGTGGCTAGGCTGCAGGTTCCTAGAATTTGAAGCTCTTGGCTTCC 258102 Query 8966 TAAACGAAGACCATTGGGTCGCGCGGGAGAATTTTCCGTGCGGTGTCGGAGGTGTGGGAG 9025 | |||| ||||| ||||| || ||||| || ||| | || || || || || || | Sbjct 258103 TCAACGCTGACCACTGGGTTAGTCGCGAGAACTTCCCGGGAGGAGTAGGGGGAGTTGGGG 258162 Query 9026 TGAATTACTTTGGGTATTACCTAAAGGAGATCGCCCAGAAAGGACAATGGCTGATAGCCG 9085 | || ||||||||| |||| | || || ||||| | | ||| ||| | | |||| Sbjct 258163 TCAACTACTTTGGGAATTATTTGAAAGACATCGCAAAAAGGGGAAAATTTTTATTCGCCG 258222 Query 9086 ACGACGTGGCAGGCTGGGACAC---TAAGATCACGGAAGCTGACCTTGAAGACGAGTTGT 9142 | ||| | || || |||||||| || | | | ||| || || || ||||| | Sbjct 258223 ATGACATTGCTGGATGGGACACTCGTATTAGCTCTGAA---GATCTGGAGGACGA--AGA 258277 Query 9143 GGCTGTTGCT---CGACATGGTGCAGGATCCCTACCATGCTCAACTCATATCCAGCGTGT 9199 || || || || ||| ||||| | ||| | ||| |||||| || Sbjct 258278 AACTCTT-CTAACGGAGTTGGCTATTGATCCTTTCCACCGTGCACTAATATCC-GCCACC 258335 Query 9200 TTAAGCATTGC-TACATGAACATGGTTGCCCTGTTCCCTCGTAATCATCCCAAGTACAGA 9258 | || | || ||| |||||| |||| | ||||||| || | ||| | || || | Sbjct 258336 ATGAGACTCGCTTACCAGAACATCGTTGTCATGTTCCCACGAACCCATTCTAAATATGGC 258395 Query 9259 AGCGGCACGGTGTTCGACGTGCTATCCCGCACGGATCAACGTGGTTCCGGACAGGTCACA 9318 || || || ||| | || || | | | | ||| ||||| || || || || ||| Sbjct 258396 AGTGGAACTGTGATGGATGTTGTTGGCAGAAGGGACCAACGCGGATCGGGCCAAGTCGTG 258455 Query 9319 ACCTACGCCCTCAACACAGTGACGAATGGAAAAAATCAGGTGGGCCGAATGCTGGAAGCT 9378 || |||||||| ||||| | || |||||||| ||||| | ||| ||| |||| | Sbjct 258456 ACATACGCCCTAAACACCATAACCAATGGAAAGGTCCAGGTTGCCCGTATGTTGGAGAGT 258515 Query 9379 GAAGGATTGCTGGAAGAACCTCTACC--TGTGATCGACACGTGGCTGG 9424 || || ||| || | | |||| || |||||| | | ||||||| Sbjct 258516 GACGGTTTGTTGCACG--CCTCACCCCTTGTGATTAATAAATGGCTGG 258561 Score = 91.5 bits (100), Expect = 1e-14 Identities = 195/293 (67%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 9745 GCCAAGGCTCATGCCCAAATGTGGGGGTTGTATTACTTCCACCGCAGGGACTTGCGATTG 9804 |||||||| | || |||||||||| | |||| ||| ||||| |||| | | ||| Sbjct 12432 GCCAAGGCCTACGCACAAATGTGGGCCCTATATTTCTTTCACCGTCGGGATCAGAGGTTG 12373 Query 9805 GGTTTCGCGGCTATMGTRTCAGCCGTTCCTTCAAACTGGATTCCGACAGGTCGCGTCTCC 9864 || ||| ||||| || || |||| || | ||| |||| || || || Sbjct 12372 GGGTTCTGTGCTATAACGTCGGCGATTCCCTCTGATTGGTTTCCTGTGGGGCGAACATCT 12313 Query 9865 TGGTCCGTGCACCAGCACGCTGAGTGGATGACCACCCAAGACATGTTGGAGGTGTGGAAC 9924 |||||| | |||||| | ||||||||||||||| | || ||| | |||||||| Sbjct 12312 TGGTCCATCCACCAGAATCATGAGTGGATGACCACTGATGATATGCTACGAGTGTGGAAT 12253 Query 9925 ACCGTGTGGATCGTTAACAATCCATGGATGATGACCAAGGACCTCGTGAAGTCTTGGACA 9984 ||| ||||| ||||| || ||| | ||| || || | || | ||| ||| Sbjct 12252 GACGTTTGGATTAGCAACAACCCGTGGGTTGCGACTAAAGAGCCAGTCATGTCGTGGGAT 12193 Query 9985 GACATCCCGTATCTTCCCAAGTCAAAAGACATCGCTTGCGGTAGCCTCATTGG 10037 || |||||||| | | ||| ||||||| || || ||||| ||||| || Sbjct 12192 GAAATCCCGTACTTGCATAAGAAGCAAGACATAGCGTGTGGTAGTCTCATAGG 12140 >seq65 Length=4361017 Score = 87.8 bits (96), Expect = 1e-13 Identities = 198/299 (66%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 9739 TGCCTAGCCAAGGCTCATGCCCAAATGTGGGGGTTGTATTACTTCCACCGCAGGGACTTG 9798 ||| | |||||||| | || |||||||||| | |||| ||| ||||| |||| | Sbjct 2220005 TGCATGGCCAAGGCCTACGCACAAATGTGGGCCCTATATTTCTTTCACCGTCGGGATCAG 2219946 Query 9799 CGATTGGGTTTCGCGGCTATMGTRTCAGCCGTTCCTTCAAACTGGATTCCGACAGGTCGC 9858 | ||||| ||| ||||| || || |||| || | ||| |||| || || Sbjct 2219945 AGGTTGGGGTTCTGTGCTATAACGTCGGCGATTCCCTCTGATTGGTTTCCTGTGGGGCGA 2219886 Query 9859 GTCTCCTGGTCCGTGCACCAGCACGCTGAGTGGATGACCACCCAAGACATGTTGGAGGTG 9918 || |||||| | |||||| | ||||||||||||||| | || ||| | ||| Sbjct 2219885 ACATCTTGGTCCATCCACCAGAATCATGAGTGGATGACCACTGATGATATGCTACGAGTG 2219826 Query 9919 TGGAACACCGTGTGGATCGTTAACAATCCATGGATGATGACCAAGGACCTCGTGAAGTCT 9978 ||||| ||| ||||| ||||| | ||| | ||| || || | || | ||| Sbjct 2219825 TGGAATGACGTTTGGATTAGCAACAACCTGTGGGTTGCGACTAAAGAGCCAGTCATGTCG 2219766 Query 9979 TGGACAGACATCCCGTATCTTCCCAAGTCAAAAGACATCGCTTGCGGTAGCCTCATTGG 10037 ||| || |||||||| | | ||| ||||||| || || ||||| ||||| || Sbjct 2219765 TGGGATGAAATCCCGTACTTGCATAAGAAGCAAGACATAGCGTGTGGTAGTCTCATAGG 2219707 Lambda K H 0.635 0.409 0.915 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34651850729860