Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_022580.1 Length=12676 Score E Sequences producing significant alignments: (Bits) Value seq1594 91.5 1e-14 seq1774 82.4 6e-12 seq1107 82.4 6e-12 >seq1594 Length=5600000 Score = 91.5 bits (100), Expect = 1e-14 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 7728 GCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCTTTAATGTCATGGGAATTA 7787 || |||||||||||||||||||| ||| |||| ||| | | ||| |||||||||| Sbjct 3582706 GCTAAAGAAAGGGAAATCAAGGAGATGGGCAGATTCTTCGCAATGATGGCATGGGAATTC 3582765 Query 7788 CGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCATTTTGTTCCATTGTTCCAT 7847 ||||| | || ||||| || || || |||| || || | ||| || ||||| ||| Sbjct 3582766 CGGGAGTTCTTCGTTGTCACCGAGCACCTAATCAAGACCCACTATGTGCCCTTGTTTCAT 3582825 Query 7848 GGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAGATG 7892 || |||| ||||| || || | ||| ||||| | |||||| Sbjct 3582826 GGCCTAACCATGGCCGACGACCATAACACCGTGATCGAGAAGATG 3582870 >seq1774 Length=2904822 Score = 82.4 bits (90), Expect = 6e-12 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 7710 TTGGTTATTGGTTTACAAGCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCT 7769 ||||| || | ||| |||||| ||| | || |||||||| ||| ||||||| | Sbjct 1686539 TTGGTGATCGCCCTACGAGCCAAGGAACGAGAGATCAAGGAGATGGGGAGATTTTTTGCC 1686480 Query 7770 TTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCAT 7829 | ||| | ||||| | | || | |||||| || |||||| | || || ||| || Sbjct 1686479 ATGATGGCGTGGGAGCTTAGAGAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCAC 1686420 Query 7830 TTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAG 7889 | ||||||||||||||| || | || |||||||| || | || ||||| | ||| Sbjct 1686419 TATGTTCCATTGTTCCACGGGCTCACCATGGCAGACGACCACAATACAGTGATAGAGAAG 1686360 Query 7890 ATGCT 7894 ||||| Sbjct 1686359 ATGCT 1686355 >seq1107 Length=3620151 Score = 82.4 bits (90), Expect = 6e-12 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 7710 TTGGTTATTGGTTTACAAGCCAAAGAAAGGGAAATCAAGGATGAGGGTCGATTTTTCTCT 7769 ||||| || | ||| |||||| ||| | || |||||||| ||| ||||||| | Sbjct 2215047 TTGGTGATCGCCCTACGAGCCAAGGAACGAGAGATCAAGGAGATGGGGAGATTTTTTGCC 2214988 Query 7770 TTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAATTAAAGAGCAT 7829 | ||| | ||||| | | || | |||||| || |||||| | || || ||| || Sbjct 2214987 ATGATGGCGTGGGAGCTTAGAGAGTTTTTTGTGGTCACAGAACATTTGATCAAAACCCAC 2214928 Query 7830 TTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTGTGATGAAAAAG 7889 | ||||||||||||||| || | || |||||||| || | || ||||| | ||| Sbjct 2214927 TATGTTCCATTGTTCCACGGGCTCACCATGGCAGACGACCACAATACAGTGATAGAGAAG 2214868 Query 7890 ATGCT 7894 ||||| Sbjct 2214867 ATGCT 2214863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40446891977600