Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_022581.1 Length=11806 Score E Sequences producing significant alignments: (Bits) Value seq1480 116 3e-22 >seq1480 Length=8353993 Score = 116 bits (128), Expect = 3e-22 Identities = 242/358 (68%), Gaps = 7/358 (2%) Strand=Plus/Minus Query 7032 ATTGCCAACCACATTGATTATGAAAAATGGAACAACCATCAAAGGAAAGAGTCTAACGGC 7091 || || || ||||| ||||||||||||||||||||| |||||| | |||| | | | Sbjct 8252950 ATCGCTAATCACATCGATTATGAAAAATGGAACAACTTTCAAAGAAGAGAGGCCACTTCC 8252891 Query 7092 CCGGTGTTCAGAGTCATGGGACAATTTCTGGGGTACCCTAGTTTGATAGAAAAGACCCAT 7151 || || |||| ||| || || |||||| | || |||| | | | | || ||| Sbjct 8252890 CCCGTTTTCACAGTGATTGGGCAATTTTTTGGACTACCTAATCTATTCGCCCGCACGCAT 8252831 Query 7152 GACTTCTTTGAGCAAAGCTTGATCTATTATAATGGCAGACCTGACTTGATGCAGAC---A 7208 || |||||||| || || || |||||| | | | || || | || || | Sbjct 8252830 GAATTCTTTGAAAAATCATTAATATATTATCGAGACCGTCCAGATCTAATAAAGGTCGAA 8252771 Query 7209 GATGGAGACGAGTTGCAAAACCGAAC--GGAAGCTTTGGTGTGTTGGAATGGTCAGAAAG 7266 ||||| | | | || || | || |||| || ||||||||||||| ||| | Sbjct 8252770 GATGGGGTGG--TCGCGAATGTGGACCCGGAAAGGATGATGTGTTGGAATGGACAGGCCG 8252713 Query 7267 GAGGATTAGAAGGACTCAGGCAAAAAGGATGGAGCATCCTCAACCTGTTGGTCATCAAAA 7326 ||||| | ||||| | || |||||||| ||||| | ||||| | ||||| ||| | | Sbjct 8252712 GAGGACTCGAAGGGTTGAGACAAAAAGGGTGGAGTGTTCTCAATTTATTGGTAATCGAGA 8252653 Query 7327 GAGAATCTAAAATCAGAAACACTAAAGTGCAAACTTTGGCCCAGGGAGACAATCAGGT 7384 | || || || | |||||||| |||| || || || ||||| ||||||||||| Sbjct 8252652 GGGAGTCACGCATTCGTAACACTAAGGTGCTCACGTTAGCTCAGGGTGACAATCAGGT 8252595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37662968241800