Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq1594 104 2e-18 >seq1594 Length=5600000 Score = 104 bits (114), Expect = 2e-18 Identities = 364/558 (65%), Gaps = 18/558 (3%) Strand=Plus/Plus Query 6308 GGGAAGATTCTTTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTA 6367 ||| |||||||| | ||||| | ||| | || | |||| || || |||| ||| | Sbjct 3582732 GGGCAGATTCTTCGCAATGATGGCATGGGAATTCCGGGAGTTCTTCGTTGTCACCGAGCA 3582791 Query 6368 TTTGATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACT-TGA 6426 | || ||||| |||| ||| || ||||| | || | |||||||| || ||| | | Sbjct 3582792 CCTAATCAAGACCCACTATGTGCCCTTGTTTCATGGCCTAACCATGGCCGACGACCATAA 3582851 Query 6427 CAGCGGTGATAAAGAAGATGATGGACACATCTTCAGGACAAGGCTTAGATAATTATGAAT 6486 || || |||| |||||||| | | | || | |||| ||| || | Sbjct 3582852 CACCG-TGATCGAGAAGATGTTAGCTGCCTCCGATGCACAAAATCCAGAGGATCCCAA-- 3582908 Query 6487 CCATTTGTA-TA-GCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGA 6544 ||| | | || || ||||| | ||||| || |||||||| |||||| || ||| Sbjct 3582909 CCAGGTCAACTATGCTAACCACCTAGACTACTCCAAATGGAACAACCATCAACGAGGAGA 3582968 Query 6545 GTCGAACGGGCCCGTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGA 6604 | || | || ||||||||||||||||| ||||| ||||| ||| | || || Sbjct 3582969 AGCCAATGACCCTGTGTTCAAGGTGATGGGCCAATTTTTGGGTCTCCCAAATTTGTTTAC 3583028 Query 6605 GAGAACTCATGAATTTTTTGAGAAGAGTCTGATATATTACAATGGACGACCAGATCTGAT 6664 ||||||| || || ||| |||| ||||| || ||||| | ||||||| || || Sbjct 3583029 TCGAACTCACGAGTTCTTTCGGAAGTCCCTGATCTACTACAAAGATAGACCAGACCTCAT 3583088 Query 6665 GCGGGT----TCGAGGAAATTC-TCTAGTCAACGCCTCATCTTTAAATGTCTGCTGGGAG 6719 | |||| || ||||| || | | |||| ||| | || || ||| || Sbjct 3583089 GAGGGTTGAATCCGGGAAAGTCATAAATGCAACAGAACAT-----ATCGTTTGTTGGAAG 3583143 Query 6720 GGTCAAGCTGGGGGATTAGAAGGACTGCGACAGAAGGGATGGAGTATTCTAAATTTGCTT 6779 || ||||| || || |||| || ||||| || || |||||||| || | || | || Sbjct 3583144 GGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGTTGTGAACTACCTG 3583203 Query 6780 GTCATTCAGAGAGAAGCAAAAATAAGGAACACCGCCGTGAAAGTG-CTAGCTCAAGGTGA 6838 | ||| || | | || || || ||| ||| | ||||| || || ||||| || Sbjct 3583204 GGCATCGAGCGTCAGGCCAAGATCCAGAATACC-CATATCAAGTGTCTGGCCCAAGGAGA 3583262 Query 6839 CAATCAGGTGATATGTAC 6856 ||| ||| | ||||| || Sbjct 3583263 CAACCAGATAATATGCAC 3583280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35515827061660