Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025340.1 Length=11176 Score E Sequences producing significant alignments: (Bits) Value seq1594 116 3e-22 >seq1594 Length=5600000 Score = 116 bits (128), Expect = 3e-22 Identities = 405/624 (65%), Gaps = 11/624 (2%) Strand=Plus/Plus Query 6222 GTCAATGACCACGGGCTCAGCCCCGAAGATCTTGTAATCGGGTTGAAACCAAAAGAAAGG 6281 |||||||| |||||||| || || | || || |||| |||| | ||||||||| Sbjct 3582658 GTCAATGATCACGGGCTTGATCCGGAGCAACTAGTTATCGCCTTGAGGGCTAAAGAAAGG 3582717 Query 6282 GAGTTAAAGGACGAAGGTC-GATTTTTCTCTCTCATGGGTTGGAATCTGAGGTTGTACTT 6340 || | ||||| || || | |||| ||| | | |||| ||| | | || || ||| Sbjct 3582718 GAAATCAAGGA-GATGGGCAGATTCTTCGCAATGATGGCATGGGAATTCCGGGAGTTCTT 3582776 Query 6341 TGTTATCACTGAGTACCTCATTAAAAAACTCTTTGTCCCACTATTCAAAGGGCTCACCAT 6400 ||| |||| ||| |||| || || | | || ||| || | || | || || ||||| Sbjct 3582777 CGTTGTCACCGAGCACCTAATCAAGACCCACTATGTGCCCTTGTTTCATGGCCTAACCAT 3582836 Query 6401 GGCTGACGACCTCAACACTGTCACTAAGAAGATGATCGCTGCAACTGAAGGCCAGGGGCT 6460 ||| ||||||| ||||| || | |||||||| | ||||| | || | || | Sbjct 3582837 GGCCGACGACCATAACACCGTGATCGAGAAGATGTTAGCTGCCTCCGATGCACAAAATCC 3582896 Query 6461 ATGTGATTACTCACGTGTGTACATAGCCAATTCACTTGATTATGAGAAGTGGAACAACAA 6520 | ||| | | || || || || || || || || ||||||||| | Sbjct 3582897 AGAGGATCCCAACCAGGTCAACTATGCTAACCACCTAGACTACTCCAAATGGAACAACCA 3582956 Query 6521 TCAACGATACGAGTCCAACCAACATGTGTTTCGAGTTATGGGGAAGTTTTTGGGCCTCCC 6580 ||||||| || |||| | | |||||| || ||||| | |||||||| ||||| Sbjct 3582957 TCAACGAGGAGAAGCCAATGACCCTGTGTTCAAGGTGATGGGCCAATTTTTGGGTCTCCC 3583016 Query 6581 AGAGATATTCTCATTGACACACAAGTTTTTTCAATCATCACTGGTATACTATTGTGACAG 6640 | | | || | || ||| |||| |||| || ||| | ||||| || || Sbjct 3583017 AAATTTGTTTACTCGAACTCACGAGTTCTTTCGGAAGTCCCTGATCTACTACAAAGATAG 3583076 Query 6641 ACCTGATCTAATGAGGG-TGA--CCGAGAATTCACTCGAAAATGTCAACGAAGAAACGCC 6697 ||| || || ||||||| ||| ||| ||| | || ||||| |||| |||| Sbjct 3583077 ACCAGACCTCATGAGGGTTGAATCCGGGAA---AGTCATAAATG-CAAC--AGAACATAT 3583130 Query 6698 AGTGTGCTGGGAGGGGCAGGCGGGCGGATTCGAAGGCTTAAGACAAAAAGGATGGAGCAT 6757 || || ||| |||| || || ||||| | || ||| | | ||||||||||||||| | Sbjct 3583131 CGTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAAAAGGATGGAGCGT 3583190 Query 6758 TGTCAACTATCTCATCCTCCGGCGGGAAATCATGATGAGAAACACCGGGACGCTGATTTT 6817 ||| ||||| || | || ||| | || ||| || ||| | | | | Sbjct 3583191 TGTGAACTACCTGGGCATCGAGCGTCAGGCCAAGATCCAGAATACCCATATCAAGTGTCT 3583250 Query 6818 GGCCCAAGGAGACAACCAAATAAT 6841 |||||||||||||||||| ||||| Sbjct 3583251 GGCCCAAGGAGACAACCAGATAAT 3583274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35647023467600