Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_025353.1 Length=11070 Score E Sequences producing significant alignments: (Bits) Value seq1594 100 2e-17 >seq1594 Length=5600000 Score = 100 bits (110), Expect = 2e-17 Identities = 231/344 (67%), Gaps = 12/344 (3%) Strand=Plus/Plus Query 6492 AAGTGGAACAATCACCAGCGGAAAGAATCCAATGGTCCTGTTTTTAGGGTAATGGGACAA 6551 || |||||||| || || || |||| |||||| ||||| || | ||| ||||| ||| Sbjct 3582943 AAATGGAACAACCATCAACGAGGAGAAGCCAATGACCCTGTGTTCAAGGTGATGGGCCAA 3583002 Query 6552 TTCCTTGGCTACCCCAATTTGATTGAACGCACCCATGAATTCTTTGAAAAAAGTCTGATT 6611 || | || ||| |||||| || || || || || |||||| || ||||| Sbjct 3583003 TTTTTGGGTCTCCCAAATTTGTTTACTCGAACTCACGAGTTCTTTCGGAAGTCCCTGATC 3583062 Query 6612 TACTATAATGGACGTCCAGACCTGATGCGAGTAAA---CGGAAACACCTTAGAA--AACA 6666 ||||| || | | |||||||| ||| | || | ||| || | || | |||| Sbjct 3583063 TACTACAAAGATAGACCAGACCTCATGAGGGTTGAATCCGGGAAAGTCATAAATGCAACA 3583122 Query 6667 GAACACCTCTCAACGTTTGTTGGCAAGGTCAAGCTGGAGGCTTAGAGGGGCTTAGACAAA 6726 ||||| || ||||||||| | || ||||| || || ||||||| || | |||| Sbjct 3583123 GAACATATC-----GTTTGTTGGAAGGGCCAAGCAGGCGGGCTAGAGGGCCTGCGCCAAA 3583177 Query 6727 AAGGATGGAGCATCCTGAATCTTCTTGTG-ATTCAAAGAGAAGCAAAGATTCGAAATACA 6785 ||||||||||| | |||| || | || | || | | | || ||||| | ||||| Sbjct 3583178 AAGGATGGAGCGTTGTGAA-CTACCTGGGCATCGAGCGTCAGGCCAAGATCCAGAATACC 3583236 Query 6786 GCGGTCAAGGTGCTAGCTCAGGGAGACAATCAGGTCATTTGCAC 6829 ||||| || || || |||||||| ||| | || ||||| Sbjct 3583237 CATATCAAGTGTCTGGCCCAAGGAGACAACCAGATAATATGCAC 3583280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35307832759560